Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3577 374 8e-99 seq5576 118 1e-21 seq5408 118 1e-21 seq3192 116 3e-21 seq4173 98.7 9e-16 >seq3577 Length=7701 Score = 374 bits (414), Expect = 8e-99 Identities = 1166/1784 (65%), Gaps = 37/1784 (2%) Strand=Plus/Plus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||| || || || |||| || |||| |||| || ||||| | || ||| ||||| || Sbjct 5701 TTTGTCGACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAATAGTACATGCC 5760 Query 138213 CGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271 || || || ||||| |||| | |||| | ||| ||||| || ||| |||| | | Sbjct 5761 AGTCTTCAAACCCATCTTCC-ACGCGTGAAAGTGGATCGAGGTAAGTTTACCGTAGTTGG 5819 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 ||| |||| |||||| |||||||| ||| |||||||| || || ||||| | Sbjct 5820 GTTCGGCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCACGATCGGCCG 5879 Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 |||| | || | |||| |||||||| || || ||||| ||||| || | | Sbjct 5880 CCATTTGGATGCACGTTTTGACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACGT 5939 Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451 |||||| | |||| || || || |||||| ||| | ||| || ||| Sbjct 5940 CCTTTGGTATTTTCTCAATCTTCTGGATCGATCCGTTGTGCGCCAGGATTGTGTTCTTCA 5999 Query 138452 TGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCT 138511 | ||||||| |||| | | ||| ||| || ||||||| ||| | |||| Sbjct 6000 TTTCATCGTCCCACAGCCCGTGCGCGGTCAGGTCCTTGATCAGATGATGGTTCACAACCT 6059 Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571 |||| || || | | ||||| || ||| | ||| ||| | ||||| || || | Sbjct 6060 GAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGCTCGAAAGACT 6119 Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631 ||||||| |||| || ||||| || | || || ||||| || | || || || | Sbjct 6120 CGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAGTGAGT 6179 Query 138632 TCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAG 138691 | || | || || ||| |||||| | | || ||| | ||||| || | | Sbjct 6180 TACGAATCCCATGTTTTGCGATCTTTTCCTTCAATGCCGCCCAATTCCACAGGTCCGTCG 6239 Query 138692 GTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACG 138751 ||| ||||||||||| |||||||| | || ||| ||| | |||| |||||||||| Sbjct 6240 GTTCCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTTACCGGACAACCTTCGTACG 6299 Query 138752 AATCGTATACACCAAACTCTTGCG-CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAA 138810 ||||| ||| || | ||| |||| ||| ||| || || | ||| |||||||| Sbjct 6300 TCTCGTACGGCCCATCCT-TGGCGGCCAATTCGCAGCTAGCTTCCAACGCCCCATAGTAG 6358 Query 138811 ATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGG 138870 || ||||| || |||||||||||| | | || | | ||||||||||| | || Sbjct 6359 ATGGTTTCAAATATTTGCTGATTGAGCTTTTGCGCTTGCTCACTCTCGTACGGAAAGCCC 6418 Query 138871 AGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGA 138930 | || ||||||| ||||||| || || || || | |||| || || ||||||| Sbjct 6419 ATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCGATCGGACGGTGGCGCATG 6478 Query 138931 TTTGACGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTTGTTTAAAT 138988 || || || ||| || | || | || || ||||| || || ||||| ||||| | || Sbjct 6479 TTCGA-GCGTTT-CGCTTCCGGCACCGGGTAGTAGTTCACGTCAATGATCTTGTTAAGAT 6536 Query 138989 TTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTG 139047 | ||| || | ||| | || | || | | | | |||||||| || || | Sbjct 6537 TGCGCGTTACGATCTT-GGCGACCTCCTTCAGCTTCTTGAAATCGTACGT----ACGAT- 6590 Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107 || | |||||| |||| | ||||||||| | |||||||| |||||| Sbjct 6591 -------CGGGCTGGACAAACATGTTCAACGCAATCGAGGCCAAATTGCACACGGCCACT 6643 Query 139108 TCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACC 139166 |||| | | || ||| || || || || | || | || ||||||||| || || Sbjct 6644 TCGTCCTTCGACG-AGTACTCCACTATCTCAGTGCAAAGGTTCGAACACTTGATGGTGCC 6702 Query 139167 TAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCC 139226 | ||||| || |||||||| || || || ||||| ||||| ||||| |||||| ||| Sbjct 6703 GATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTACGGTACGCC 6762 Query 139227 AGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCAC 139286 |||||||| |||| ||| || || ||| || || | | |||||| | Sbjct 6763 CGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTGCGCCTTCACTTGACGTA- 6821 Query 139287 GTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCG 139344 |||| | || |||||| ||| || | ||||| ||| || | | Sbjct 6822 -TAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAACTCTTCGCCCCACGAA 6880 Query 139345 TCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACG 139404 || | | || |||| | || || ||||| | ||| | | ||||||| || Sbjct 6881 TCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTCATTCGCCTCCACA 6940 Query 139405 CGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCT 139464 ||| |||||||||||||||| ||||| | |||| | | || ||||| || || Sbjct 6941 CGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCGAGCGCGAACCTCC 7000 Query 139465 TCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCC 139524 ||| || |||| |||| | || || ||||| || ||| ||||||| ||||| Sbjct 7001 TCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCGTGCCACGGTTCG 7060 Query 139525 AGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCA 139581 || ||||| || | |||||| ||| || || || ||||| |||| ||| | | Sbjct 7061 AGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGTACCGTGCCGTG 7120 Query 139582 TTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG 139641 || ||| | || || | |||||| ||| ||| ||| | ||||| || | |||| Sbjct 7121 TTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCGTAC--CGGAGA 7178 Query 139642 GGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGG 139699 | ||| | || |||| | || ||||| | ||||| || ||| | |||||| Sbjct 7179 TGTACGTTCCCTTCGCACGGATGCAGTGCACATTCAGCCCGATACCACCGGCCGATTTGG 7238 Query 139700 ATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATC 139758 | || || |||| | || | ||||| ||||| ||||| ||||| |||||| |||| Sbjct 7239 AGATCAATGCGCACT-GCTTCAATGTATCGTAGATACCGTCGATGCTATCGTCCGACATC 7297 Query 139759 GTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGA 139818 || | ||||||||| |||||||| || || | | ||| | || ||||||| || ||| Sbjct 7298 GTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCAAACATGGTCGGA 7357 Query 139819 CTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATA 139878 ||||| || || | | ||| | || | |||||| ||||| || | |||| Sbjct 7358 GAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATCGCTGCCTCAATG 7417 Query 139879 TCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 ||| |||||||| |||| | ||| ||||||| |||||| || Sbjct 7418 TCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTG 7461 >seq5576 Length=36905 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| || | ||||| || ||||| || || || || || || || || || Sbjct 18557 ACGATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACTCTTGAGGTCGAGCCC 18616 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | |||| || || ||||| || || || ||||| || ||||| ||| Sbjct 18617 TCGGACACGATCGAAAATGTGAAGGCCAAGATTCAGGATAAGGAAGGCATCCCTCCGGAT 18676 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| ||||||| ||||| || |||||||| ||| | | | |||| || || Sbjct 18677 CAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGTACCCTGTCGGACTAC 18736 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| || || || ||| ||||| | ||| | || || || Sbjct 18737 AATATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGACTCCGTGGTGG 18786 >seq5408 Length=43822 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 37144 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 37085 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || || || || || ||||| Sbjct 37084 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGATCA 37025 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| ||||| || |||||||||||| | | |||| ||||| || Sbjct 37024 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAA 36965 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || || ||||| | || ||||||| || Sbjct 36964 TATCCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGG 36917 >seq3192 Length=14073 Score = 116 bits (128), Expect = 3e-21 Identities = 176/244 (72%), Gaps = 10/244 (4%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 || ||||||| | || ||||| || || || || || || || || || || |||| || Sbjct 2 TGGAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGA-GCCATCG 60 Query 24765 -ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 | || | || | || || |||||||| ||||| || ||||| ||||| ||||| Sbjct 61 GATACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCAGATCAG 120 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 || ||| ||||||| ||||| || ||||||||||| || || || |||| || || Sbjct 121 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGA--CG-GACGCACTCTGTCCGACTAC 177 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAG 24940 ||||| || ||||| ||||| | |||||||| | || ||||||| | | ||||||| Sbjct 178 AACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGCGGTG--GAAACTGAG 235 Query 24941 CCAA 24944 ||| Sbjct 236 TCAA 239 >seq4173 Length=11039 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| |||||||| ||||| ||||| ||||| || | | Sbjct 8269 ATGCAGATTTTTGTGAAAACTCTAACCGGGAAAACGATTACCCTCGATGTGATCGGGTCG 8328 Query 24764 GACACAGTAGAA-ACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | || || | || |||| ||| || | || ||||||||| | ||||| || Sbjct 8329 CAAACGGTGCTAGACATCAAAAGCAAA-ATAGAGGAACGCGAAGGAATAGCGCCCGACCA 8387 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||| | |||||||| || || |||||| | ||| ||| || ||||||||||| Sbjct 8388 ACAGCGTATCATCTTTGCTGGCAAGCAGCTGAACGATGATCGAATTATCTCAGATTATAA 8447 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || | | |||||| | || ||||| |||||||| ||||| Sbjct 8448 CATCCAGCATGGATCGACGATGCATCTGGTGCTGCGATTGAAGGGAGG 8495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449780772840720