Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq12349 158 1e-33 seq7220 105 6e-18 >seq12349 Length=7458 Score = 158 bits (174), Expect = 1e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||| || | |||||||||||| || || ||||| ||||||||||| |||||||| | Sbjct 335 TTGTGGTCAAACTGCGTTTGCGCCCCAAGTTCGCAACCGAAGTACTTGGTCGGGTAGGTA 394 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || ||||| || | ||| ||| | ||| | |||||| ||||| || |||||||| ||| Sbjct 395 GCGGGACGACCGATCGCTCGGGCCACTTCCGCCATGTTCACGATCACCGTCTTGATACCG 454 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || || || || || |||||||| |||||| ||||| ||||| |||||||| || Sbjct 455 TTTCCTTTACCCTCTACCTTGGCATTGATGCGAGGCATCTTGTACCGGTAGAAGATATCG 514 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | ||| || ||||| ||||| || ||| |||| Sbjct 515 GTCACGTTACGGTTCACGTTTACGGTCGCCAT 546 >seq7220 Length=9813 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| ||||| || | ||||| ||||| | ||| || | | |||| ||||| | Sbjct 9109 CGGTGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTCACCTCGAGCGGACCGTGGAA 9168 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 || || || ||||| ||||| | || | ||| || | ||||| | || || || Sbjct 9169 GCCACAAGCCTTGCATCCCTGCGAAATCGTACCCTTCTTTGACGACACCAGCAGATCCGT 9228 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||||||||||| || ||||| |||| || ||| ||| ||||| ||||| ||||| || Sbjct 9229 TTCCGGGTTGTCGCACTCCGGGCACAGGACGAACCGGCGAATGAATCCATCCAGCAGATC 9288 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | |||| ||| ||||| | || || || ||||| |||||||| Sbjct 9289 CTGCAGCTTAGCGGCATCGTGCGCACCATTCACAATGAAGCGTTCGTT 9336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412737075473582