Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3577 453 1e-122 seq17361 206 3e-48 seq5408 138 1e-27 seq5576 125 7e-24 seq3192 122 8e-23 >seq3577 Length=7701 Score = 453 bits (502), Expect = 1e-122 Identities = 1155/1742 (66%), Gaps = 28/1742 (2%) Strand=Plus/Plus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010 ||||||| |||||||||||| ||||| | ||||| ||| |||| ||| | ||| Sbjct 5741 GTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAGTGGATCGAG 5800 Query 148011 GACA--TGAGCGTGTACGTCGGGTGCGGC-ACAAACAGATTAAACGACTGGCTCTGGTCA 148067 | | | | ||| || |||| |||| || | || ||||| ||| |||||| Sbjct 5801 GTAAGTTTACCGTA---GTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGACTGGTCG 5857 Query 148068 ATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTT-ATCTTCATCTCCCAGGC 148126 |||||||| ||||| || || ||||||| ||| || ||| | | |||||||| | Sbjct 5858 ATGAACGCTCCACGATCGGCCGCCATTTGGATGCA-CGTTTTGACCGAAATCTCCCAAAC 5916 Query 148127 CGTCTTGTACAGC-CGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGC 148185 ||| |||||||| ||| | | | || || || || ||| | ||| ||| Sbjct 5917 CGTTTTGTACAGATCGCGC-ACGTCCTTTGGTATTTTCTCAATCTTCTGGATCGATCCGT 5975 Query 148186 GGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCAT 148245 |||||| | || || |||||| || | || | || || ||||||| | Sbjct 5976 TGTGCGCCAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTCAGGTCCT 6035 Query 148246 CGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGT 148305 |||||||| || ||||| |||||||||||||| | ||||| || || || |||| Sbjct 6036 TGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGT 6095 Query 148306 TGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGG 148365 | ||| |||| || || ||||||||||||||||| || || || |||| || || | Sbjct 6096 TCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTG 6155 Query 148366 GCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAG 148425 |||| |||| |||||| ||||| || | || | ||| || || ||||| | Sbjct 6156 GCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTTCAATG 6215 Query 148426 CCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGC 148485 ||||||| | ||| || || |||| | ||||||||||||||||||||||||||| Sbjct 6216 CCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATGCCCT 6275 Query 148486 GGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGC 148545 ||| | || | || ||||||| |||||| || | | || |||| |||||||| Sbjct 6276 TGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCGCAGC 6335 Query 148546 TCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCG 148605 | || || | ||| || ||||| || || || |||||| |||||| ||| Sbjct 6336 TAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTTGCGCTT 6395 Query 148606 ACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCA 148665 ||| || |||||||| | | || | | ||||| ||||| | ||||| || || | Sbjct 6396 GCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGA 6455 Query 148666 CGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTTGC 148725 ||| || || ||||| ||||| ||| | ||| | | ||| |||| ||| Sbjct 6456 TGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGTAGTTCA 6515 Query 148726 GGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGC-GCAGCAATTCA 148784 ||| |||||||||| |||||||||| || | ||| | | || | |||| | Sbjct 6516 CGTCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGA-CCTCCTTCAGCTTCTTG 6574 Query 148785 AAATCGTACTTGTCATC------TACGATGCATCGGTTCACGGCGATAGAGGCTAGATTG 148838 ||||||||| | ||| || | ||| ||||| || || ||||| | |||| Sbjct 6575 AAATCGTACGTACGATCGGGCTGGAC-AAACAT--GTTCAACGCAATCGAGGCCAAATTG 6631 Query 148839 CACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCAT 148898 ||||||||| || ||| | |||||| || ||||| | ||| || || || Sbjct 6632 CACACGGCCACTTCGTCCTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTTCGAACAC 6691 Query 148899 TTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATG 148958 ||||| ||| | ||| | || ||||| |||| |||||||| ||||||||||||||| Sbjct 6692 TTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATG 6751 Query 148959 TACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT--GAACCGATGCAGGTCCTGCGCGC 149016 |||||| |||| ||||||||||| | || | || || | | ||| || ||||| Sbjct 6752 TACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCA--CAGATCTTGCGCCT 6809 Query 149017 GCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCT 149076 |||||| | | |||| ||| |||||| || |||||| ||||||| | | Sbjct 6810 TCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAACTCTT 6869 Query 149077 CGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGT 149136 |||| | ||||| | | ||||| || | |||||||||||| | ||||| | | Sbjct 6870 CGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTCAT 6929 Query 149137 CCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCG 149196 ||| | ||| |||||||| |||||||| || | |||||| ||||| | | |||||| | Sbjct 6930 TCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCGAG 6989 Query 149197 CCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGT 149256 | || || ||| |||| ||| | || | || | || ||| Sbjct 6990 CGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCGT 7049 Query 149257 GCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGT 149313 ||||||| || | ||| | || | |||||| ||| || |||||||| || |||| Sbjct 7050 GCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGT 7109 Query 149314 GGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAG 149373 || || ||||||| |||| || | ||| ||| | | || | | | | ||||| | Sbjct 7110 ACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCG 7169 Query 149374 TAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGC 149433 || | ||| | || ||| || | |||||| || | ||||| || ||| Sbjct 7170 TACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCAGCCCGATACCACCGG 7229 Query 149434 CGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGC 149493 | | || ||||| ||||| | | || |||||| || |||||||| ||| Sbjct 7230 CCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATGCTATCGT 7289 Query 149494 GCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACA 149553 | ||| |||||||||||||| || | | || ||| | ||| | ||||| |||| Sbjct 7290 CCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCAAACA 7349 Query 149554 TGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGC 149613 |||| || |||||| ||||| || || | || | ||||| ||||| | | Sbjct 7350 TGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATCGCTG 7409 Query 149614 GGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCT 149673 || ||||| ||||| |||||||| |||||||| ||||||| |||||||||||| | || Sbjct 7410 CCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGCGGCCTCT 7469 Query 149674 CC 149675 || Sbjct 7470 CC 7471 >seq17361 Length=8649 Score = 206 bits (228), Expect = 3e-48 Identities = 503/745 (68%), Gaps = 38/745 (5%) Strand=Plus/Plus Query 120453 GCCCAACTGTACGAGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGC 120512 |||||||| | |||| || ||||| || ||||| ||||||| |||| | | ||| Sbjct 516 GCCCAACTCCAGCAGCAACCGATCCGCGACGAACTCGATGTACTGCGACATC-AGTTCGC 574 Query 120513 -GTTCATGCCCAGCAACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCA 120571 ||||||||| |||| | ||||||| |||| |||| ||||||| ||| || | | Sbjct 575 AGTTCATGCCGAGCATGTCGACCGGCAGCGCCTTGGTGAGGAACTCCTGCTCGATCACGA 634 Query 120572 CCGCCTCCTTGAACATGGCGAGCATAGTGTGGCCGGGCATCTT----GTGTTCGATGCGC 120627 |||| || || || | || || || ||| | ||| ||| | Sbjct 635 CCGCATCGCGGATGATCTCCGTCA---------CGCGCTCCTTAGACGGTTTC--TGCAC 683 Query 120628 --GTT--CGGTAGTACAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAG 120683 | | ||| | |||||| |||||||| |||||| |||||||||||||| ||||| Sbjct 684 CAGATACCGGAACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAG 743 Query 120684 CTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGC 120743 ||||||| |||||||| || ||||| | ||| | |||| | |||| || || || Sbjct 744 CTCGTTGGAGAACGTCAGCCCCGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGC 803 Query 120744 AAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAA 120803 ||||||||| ||||| | |||||| ||| || ||||| |||| ||||| | || Sbjct 804 AAAGCTGCCACTGAAGAAAATGCCCTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAA 863 Query 120804 CGTCGCCGTCTTGCTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 | ||| |||||||| |||||| |||| ||||| |||||||| || |||||||| Sbjct 864 GTTGGCCTTCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGG 923 Query 120864 CATCCGCTCGAACGCGTTCAGCAGCATGTCGCGCTCGCCCTCCTC-CGCAATCAGCTGAT 120922 | | |||| |||||| | ||| || |||||| | || || | | || | Sbjct 924 TAGCGTTTCGATCGCGTTGAACAGATACTCCCGCTCGTTCGGGTCGCGTATGTACGTG-T 982 Query 120923 GGATGAGCAGATTGTACATTTCCGTGTGCACGCACTCGATCAGCACT-TGCTGGTTGTAA 120981 ||| ||||| ||||||||| |||||||| ||| ||| ||| | || ||| Sbjct 983 CGATCAGCAGCGAGTACATTTCACTGTGCACGTTCTCCATC-GCAATCTGAAACCCGTAG 1041 Query 120982 AAGTACTGCGCCTCCAGCTCGGGCACCGCC-CGCTGCATGTACTCGATAAGGTTAATATT 121040 ||| | | |||||| | | ||||| || |||| | | ||| | || || || Sbjct 1042 AAGCAGCGGGCCTCCGTCACCTGCACCTCCTGGCTG-AAGCGCTCCACCAGATTCTCGTT 1100 Query 121041 CACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTC 121100 ||||||| ||| | |||||||||||| || || |||||| ||| ||||| |||||| Sbjct 1101 TACGATACCGTCCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCG-- 1158 Query 121101 GTCCGTGAGCTTGTGCG---CAAAATC-GTCATAGTCCTTGGACAGGTCGACCTCCTCCA 121156 || || ||| ||| | | || |||| |||||| |||||||| ||||| |||| Sbjct 1159 CTCGGT----TTGAGCGATTCCCAGTCTTTCAT-GTCCTTCGACAGGTCCACCTCTTCCA 1213 Query 121157 CCTTCCACATGCAATCGAGCGCCTG 121181 | |||| | | || | |||||| Sbjct 1214 CTGTCCAGAAGGAAGCTTCCGCCTG 1238 >seq5408 Length=43822 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| |||||||||||| || |||| | | | ||||| |||| Sbjct 36940 ATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGGCCA-TCCTCCAGCT 36998 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | ||||| |||||||| || || ||||| || |||||||| ||||| Sbjct 36999 GCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGGATCT 37058 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | ||| || | |||||| || || | ||| | ||| || || | Sbjct 37059 TCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCG 37118 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| ||||| |||||||| Sbjct 37119 TGAGGGTTTTGACGAAGATCTGCAT 37143 >seq5576 Length=36905 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| |||||||| || || || | | | || || |||||||| || Sbjct 18756 GTGGACTCCTTCTGGATATTGTAGTCCGACAGGGTACGGCCA-TCTTCCAGCTGCTTTCC 18698 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||||||||||||||| || ||||| ||| Sbjct 18697 GGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCCTGAATCTTGGCCTT 18638 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | |||||| || || | |||| ||| |||||||| || || Sbjct 18637 CACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGTGT 18578 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 18577 TTTCACGAAAATCTGCAT 18560 >seq3192 Length=14073 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||| ||||| || ||||| ||| || ||| |||||| ||| Sbjct 206 AAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGC 147 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || |||||||| || |||||||| || |||||||| |||| Sbjct 146 TGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATC 87 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | ||| | ||| || | ||||| || || | |||| ||| ||||| Sbjct 86 TTGGCCTTGACATTCTCGATCGTATCCGATGGCTCGACCTCCAGAGTGATGGTCTTGCCA 27 Query 133635 GTCAGAGTTTTTACGAAAATCTGCA 133659 ||||| || || ||||| |||| || Sbjct 26 GTCAGCGTCTTCACGAAGATCTCCA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483295267703760