Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3577 324 1e-83 seq17361 102 8e-17 seq5576 102 8e-17 >seq3577 Length=7701 Score = 324 bits (358), Expect = 1e-83 Identities = 1212/1875 (65%), Gaps = 68/1875 (4%) Strand=Plus/Plus Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATT 146633 || || || ||||||||||| |||||||| || || | || |||| ||||| |||| Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACC-CATCTTCCACGCGTGAAA 5790 Query 146634 GTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCT 146693 ||| ||||| || | | |||| | || || |||||| | || ||||||||| Sbjct 5791 GTGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGA 5850 Query 146694 TTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTCATT- 146751 || || ||||| || || ||||||||||| | || || ||||||| | | | Sbjct 5851 CTGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCA--CGTTTTGACCGAAATC 5908 Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATA 146811 |||||| | ||||||||||| | ||| | ||| || ||||| || || || Sbjct 5909 TCCCAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCAATCTTCTGGATC 5968 Query 146812 GAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAA-AGGTTTAGTTTAAT 146870 || || |||||||| | || ||||| ||||| ||| | || | | Sbjct 5969 GATCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCAT-CGTCCCACAGCCCGTGCGCGGT 6027 Query 146871 GAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAG 146930 ||||| | || | || || || || || ||||||||||||| ||||| |||| | Sbjct 6028 CAGGTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTT 6087 Query 146931 ATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGT 146990 || || || ||| | ||||| |||||||| || ||||| |||||||| || || | Sbjct 6088 GTAGACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGA 6147 Query 146991 TGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTC 147050 || || ||||| || | || || ||| || || | || | ||| || || Sbjct 6148 AGCTGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTC 6207 Query 147051 CTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAG 147110 |||||| | ||| | ||||| || || | |||||||||||||||||| || Sbjct 6208 CTTCAATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAG 6267 Query 147111 CACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAG----CTTCCGTCGCGCTGCG 147166 | || || | |||| || || |||| ||| | ||| | ||| | Sbjct 6268 AATGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCG----G 6323 Query 147167 CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTA 147226 ||||||| ||||| || || | ||| |||||||| |||||||| ||||| | || | Sbjct 6324 CCAATTCGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGA 6383 Query 147227 GGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAAC 147286 | ||||| || |||||||| || | | || | | || |||||||||| || Sbjct 6384 GCTTTTGCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATAC 6443 Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGG 147346 |||||| ||||| |||||| || || || ||| ||| ||||| || | | Sbjct 6444 CCTGGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCG 6503 Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406 | |||| ||| ||||| |||||||| || || ||| ||| | || | | | Sbjct 6504 GGTAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCT 6563 Query 147407 TGAGTTTCTCGAAATCATAAGTCCCGTCT---TCGACACGTACGCATTGGTTCACGGCGA 147463 | || |||| |||||| || || | || | |||| ||| ||||| || | Sbjct 6564 TCAGCTTCTTGAAATCGTACGTACGATCGGGCTGGACAAA----CAT--GTTCAACGCAA 6617 Query 147464 TAGACGCCAGATTGCAGACGGCC-----GTCTCTTCGGCGTCGCTGTACTGCACGATTTC 147518 | || |||| |||||| |||||| ||| ||||| || ||||| ||| || || Sbjct 6618 TCGAGGCCAAATTGCACACGGCCACTTCGTC-CTTCGACGA----GTACTCCACTATCTC 6672 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578 | ||| ||||| || || ||| || | |||||||| |||||||| |||||||| Sbjct 6673 AGTGCAAAGGTTCGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCA 6732 Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAA 147635 ||| || ||| | |||||||||||| |||| || || || || | || | ||| ||| Sbjct 6733 CGCATCCTTGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAA 6792 Query 147636 CCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTC 147695 || ||| || ||||| ||| | | | | || | ||| ||||| | | Sbjct 6793 CC---ACAGATCTTGCGCCTTCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGT 6849 Query 147696 GTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACA 147755 ||||| | ||| ||||| ||||| | ||||||| | |||||||| | ||||| || Sbjct 6850 GTACAGCTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCA 6909 Query 147756 CATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAG 147815 ||||| |||||| || | ||| | || || ||| ||||||||||| | ||| || Sbjct 6910 CATCAAACTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAG 6969 Query 147816 CGCGTACATAAGATCGCGCGCTTTGCAA---TCCTCGGCGCCCATGTTGCGTTTCAAATT 147872 ||||| | | ||||| || || | ||||| ||| |||| |||| || Sbjct 6970 AGCGTAGAACATGTCGCGAGC---GCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATC 7026 Query 147873 AAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACG 147932 || | | | | || ||||||| ||||| | ||||| || | ||| ||| || Sbjct 7027 CAGAAACTCAAACACATCACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCG 7086 Query 147933 C---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTC 147989 | || |||||||| || || | || || ||||||| |||| || | ||| ||| | Sbjct 7087 CTTATTACCGCCCTGATCAACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTAC 7146 Query 147990 CAGGCCGCTCGCAGTGCCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTC 148046 || ||| ||| | | ||||| || ||| ||| | | || || || | Sbjct 7147 CAACCCGTTCGAAATACCGTTCGTACCGGA---GATGTACGTTCCCTTCGCACGGATGCA 7203 Query 148047 GTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGT 148106 |||||| || | || || || ||| | | || || || ||||| | |||||| Sbjct 7204 GTGCACATTCAGCCCGATACCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGT 7263 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGTTTTTGA-CGCCAAGCAAAAAACACGAACACATTT 148165 |||||| ||||||||||| |||| | || | |||| ||| || || | | | Sbjct 7264 ATCGTAGATACCGTCGATGCTATCGTCCGACATCGTC-AGCAGAAAGCAAGACGAAAGCT 7322 Query 148166 GCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGAC 148225 | ||| | | || |||||| || | ||| ||| ||||| ||||| | | Sbjct 7323 GAGGACGCTGGGTGGCCGCCGCAAACATGGTCGGAGAGGCGTGGGTAAA----GTAACGC 7378 Query 148226 TCATCATGC-GA---TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGC 148281 || | || || |||||||| || || | || ||||| |||||||| ||||| | Sbjct 7379 TCCGAAAGCAGATTGTACGTCTCGATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATG 7438 Query 148282 GCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGA 148341 ||||| ||||| | ||| ||||| || | || ||| | || ||||| | | | Sbjct 7439 GCGACACGCATCAACATATGCTGCGGCCTCTCCACAATCTTTCCCTTTATCTTCAACAAA 7498 Query 148342 TATCCAT-TTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGC 148400 || | || || || ||||| |||| || || || || |||| || | |||||| Sbjct 7499 TA-CGATCGCTCCAGCGTTTTAAAACCGAAATAGTTATACCCAAAGTCACGATCGTAAAT 7557 Query 148401 GATGGCCGCATCTAG 148415 |||||||| || ||| Sbjct 7558 GATGGCCGAATTTAG 7572 >seq17361 Length=8649 Score = 102 bits (112), Expect = 8e-17 Identities = 347/528 (66%), Gaps = 11/528 (2%) Strand=Plus/Minus Query 46461 TGGAAGGTGGAGGAGGTGGATCTGTCTAGGGACTATGAC-GACTTTGAGTCTAAATTAAA 46519 |||| ||||| |||||||| ||||| | |||| |||| |||| || || | ||| Sbjct 1220 TGGACAGTGGAAGAGGTGGACCTGTCGAAGGAC-ATGAAAGACTGGGAATCGC--TCAAA 1164 Query 46520 CGATGACGAACGTTACTTTATCAAGCACGTGTTGGCGTTCTTTGCCGCCGCCGATAGCAT 46579 | | ||| ||| |||| ||| |||||| | || ||||| |||||| | || | || Sbjct 1163 CCGAG-CGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCGCCGCCTCGGACGGTAT 1105 Query 46580 CGTGAATATTAACCTCATCGATTACATGCAGCAAAAAGTTCC-GGAATTGGAAGCGCAGT 46638 ||| || || || | || | | |||| | || | | || ||| || | | Sbjct 1104 CGTAAACGAGAATCTGGTGGAGCGCTT-CAGCCAGGAGGTGCAGGTGACGGAGGCCCGCT 1046 Query 46639 ATTTTTACAACCTTCA-AGTGCTCATCGAGTGCGTACACACTGAGATGTATAGTCTGCTC 46697 || ||| |||| | ||| || ||| ||| |||| ||| ||||| ||||| Sbjct 1045 GCTTCTACGGGTTTCAGATTGCG-ATGGAGAACGTGCACAGTGAAATGTACTCGCTGCTG 987 Query 46698 ATAGAACAATTGATTAGAGACGAGCACGAGCGCGACACGTTGCTGAATGCGTTCGAGCAC 46757 || || | || | ||| | ||||||| || || | || ||| |||| || Sbjct 986 ATCGACACGTACATACGCGACCCGAACGAGCGGGAGTATCTGTTCAACGCGATCGAA-AC 928 Query 46758 G-TGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGC 46816 | | || ||||| || |||||| | ||||| |||| |||||| ||| ||| || Sbjct 927 GCTACCGTGCGTCAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGC 868 Query 46817 CACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAG 46876 || | | ||||| |||| || ||||| || || ||| | || || ||||| Sbjct 867 CAACTTCGGGGAGCGTGTGGTTGCCTTCGCTGCCGTTGAGGGCATTTTCTTCAGTGGCAG 808 Query 46877 TTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAA 46936 ||||| || || || | | || | ||| |||||||||| ||||||||| || Sbjct 807 CTTTGCGGCTATCTTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTCCAA 748 Query 46937 CGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT 46984 |||| |||||||||||||||| ||||| ||| |||||||| || || Sbjct 747 CGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCCTGCCT 700 >seq5576 Length=36905 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || || |||||||| || |||||| |||||| ||||| || |||| Sbjct 18753 GACTCCTTCTGGATATTGTAGTCCGACAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCG 18694 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| ||||| |||||||| ||||| ||| || |||| Sbjct 18693 AAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCCTGAATCTTGGCCTTCACA 18634 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | ||||| || || | || | || || || || || ||||| Sbjct 18633 TTTTCGATCGTGTCCGAGGGCTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGTGTTTTC 18574 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 18573 ACGAAAATCTGCAT 18560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476487435986640