Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3577 118 9e-22 >seq3577 Length=7701 Score = 118 bits (130), Expect = 9e-22 Identities = 307/460 (67%), Gaps = 16/460 (3%) Strand=Plus/Plus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||| ||||| | ||| |||| || || || | || |||||||||||| ||||| Sbjct 5708 ACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTC 5767 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTA---TAGCTCGGATCG 136755 |||||| ||| ||| | | | || || || | || |||| ||| | || ||| Sbjct 5768 AAACCCATCTTCCACGCGTGAAAGTGGATCGAGG---TAAGTTTACCGTAGTTGGGTTCG 5824 Query 136756 GCCACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATG 136815 |||||| | || | ||||||| ||| |||||| | | ||| || || || ||||| Sbjct 5825 GCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCACGATCGGCCGCCAT- 5883 Query 136816 TTCAATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGG 136873 || || | || ||||| | ||| |||||| | ||||| | || || || | Sbjct 5884 TTGGAT-GCACGTTTTGACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACGTCCT 5942 Query 136874 GCGGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATT---TTCATCATGA 136930 || |||| || || ||||| | |||||||||| | |||| ||| |||| Sbjct 5943 TTGGTATTTTCTCAATCTTCTGGATCGATCCGTTGTGCGCCAGGATTGTGTTCTTCATTT 6002 Query 136931 GATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTT 136990 ||| ||| | | || | | | || | | || ||||| || || || || | Sbjct 6003 CATC-GTCCCACAGCCCGTG--CGCGGTCAGGTCCTTGATCAGATGATGGTTCACAACCT 6059 Query 136991 GATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATT 137050 || | |||||||| ||||||| || ||| | || ||| |||||||||| || | Sbjct 6060 GAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGCTCGAAAGACT 6119 Query 137051 CGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCAT 137090 ||||||| ||||| || || ||||||| ||||| ||||| Sbjct 6120 CGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTGGCAT 6159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444978820111680