Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3577 197 1e-45 seq5576 120 3e-22 seq5408 86.0 6e-12 >seq3577 Length=7701 Score = 197 bits (218), Expect = 1e-45 Identities = 722/1109 (65%), Gaps = 35/1109 (3%) Strand=Plus/Minus Query 8203 CGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGT 8262 || |||||||| |||| || ||| || || ||||| | || ||||| || Sbjct 6819 CGTCAAGTGAAGGCGCAAGATCTGTGGTTTGCGATCATCGAGTCACAGGTGGAAACGGGC 6760 Query 8263 ATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGC 8322 | ||||||||||||||||| || || ||||| ||||||||| || ||| | ||| Sbjct 6759 GTACCGTACATGCTGTACAAGGATGCGTGCAATCGCAAAAGCAACCAGCAAAACATCGGC 6700 Query 8323 ACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTG 8382 ||||| || || || ||| |||| || || ||||| || ||||||||| Sbjct 6699 ACCATCAAGTGTTCGAACCTTTGCACTGAGATAGTGGAGTACTCGTCGAAGGACGAAGTG 6640 Query 8383 GCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCAAACACT 8442 ||||| |||||| | || ||| | || ||| ||| || | | || || || Sbjct 6639 GCCGTGTGCAATTTGGCCTCGATTGCGTTGAACATGTTTGTCCAGCC-CGATCGTACG-- 6583 Query 8443 TACGACTTTGAACAAT-TGAAAAACGCCGTGCAAGTGACGGTA---CGCAATTTAGATCG 8498 ||||| ||| || || |||| | | || |||| | ||| |||||| | | Sbjct 6582 TACGA-TTTCAAGAAGCTGAAGGAGGTCGC-CAAG--ATCGTAACGCGCAATCTTAACAA 6527 Query 8499 CATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCG---CGCGTATCGAACATGCGCCA 8555 |||||||| || || | || || || |||||| ||| |||||||||||||| Sbjct 6526 GATCATTGACGTGAACTACTACCCGGTGCCGGAAGCGAAACGC---TCGAACATGCGCCA 6470 Query 8556 CAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCC 8615 | | || | ||| | || || || ||| ||||||| ||||| || || || | || Sbjct 6469 CCGTCCGATCGGCATCGGTGTCCAGGGTATGGCCGATGCGTTCATTTTGATGGGCTTTCC 6410 Query 8616 CTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGG 8675 ||||| || | |||||| | |||||| ||||| ||||| | || || || Sbjct 6409 GTACGAGAGTGAGCAAGCGCAAAAGCTCAATCAGCAAATATTTGAAACCATCTACTATGG 6350 Query 8676 CGCATTAGAAGCCAGCTGTCAACTTGCC--CGAGAATTGGGCACGTACGAATCGTACGCG 8733 || || ||||| ||||| || | ||| | || || |||| ||||||| |||||| Sbjct 6349 GGCGTTGGAAGCTAGCTGCGAATTGGCCGCCAAGGAT-GGGC-CGTACGAGACGTACGAA 6292 Query 8734 GGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACG---CCCACC 8790 || | || | ||| || || |||| |||||||||||||| || | || || Sbjct 6291 GGTTGTCCGGTAAGCAAGGGCATTCTGCAGTACGACATGTGGAA---CAAGGAACCGACG 6235 Query 8791 TCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCG 8850 ||||||||||| | ||||| || || || || || | || || || Sbjct 6234 GACCTGTGGAATTGGGCGGCATTGAAGGAAAAGATCGCAAAACATGGGATTCGTAACTCA 6175 Query 8851 CTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCC 8910 ||| || | || ||||| || || |||||||||||||| |||| |||||||| || Sbjct 6174 CTGCTGCTAGCACCGATGCCAACAGCTTCGACTGCTCAAATATTGGGCAACAACGAGTCT 6115 Query 8911 TTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTTTTTAATG 8970 || ||||||| ||| ||||| ||| |||||||| | | ||||| ||| | Sbjct 6114 TTCGAGCCGTACACGTCGAACGTCTACAACCGACGAGTGCTTTCGGGCGAGTTTCAGGTT 6055 Query 8971 CTGAATCGTCATTTGATGCGCGACTTGATCG-AAGCGGGCGTTTACGACGACAAAATGCG 9029 |||| | |||| |||| ||| ||| || ||||| | | ||||| ||||| Sbjct 6054 GTGAACCATCATCTGATCAAGGACCTGACCGCGCACGGGC-TGTGGGACGATGAAATGAA 5996 Query 9030 CGATGCCATCGTGGAAGCCAACGGCAGCG-TTCAGAACATTGACGCGGTGCCTCAACACA 9088 | | ||| ||| |||||| | || | ||||| ||||| | || | || Sbjct 5995 GAACACAATCCTGGCGCACAACGG-ATCGATCCAGAAGATTGAGAAAATACCAAAGGACG 5937 Query 9089 TTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAG--CAAAGCACGCTGATCGGCATGGC 9146 | || ||||| ||||| |||||||| || | |||| ||| ||| ||||| Sbjct 5936 TGCGCGATCTGTACAAAACGGTTTGGGAGATTTCGGTCAAA--ACGTGCATCCAAATGGC 5879 Query 9147 TGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACC 9206 || ||| | || || || || || ||| ||||| || ||| | ||| |||| ||| Sbjct 5878 GGCCGATCGTGGAGCGTTCATCGACCAGTCCCAATCGTTCAACATACACGTGGCCGAACC 5819 Query 9207 AACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGG 9266 | |||| | | || || || | | | ||||| |||||||| || || || Sbjct 5818 CAACTACGGTAAACTTACCTCGATCCACTTTCACGCGTGGAAGATGGGTTTGAAGACTGG 5759 Query 9267 CATGTACTATTTGCGCACAAAACCCGCCG 9295 |||||||||||||||||| || || |||| Sbjct 5758 CATGTACTATTTGCGCACGAAGCCGGCCG 5730 Score = 116 bits (128), Expect = 4e-21 Identities = 281/419 (67%), Gaps = 11/419 (3%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || ||| || |||| || || | ||||| |||||||| |||||||| || || | Sbjct 7461 CAGCATATGTTGATGCGTGTCGCCATCGGCATCCACGGCGAGGACATTGAGGCAGCGATC 7402 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | || | || | | ||||| ||||| || || ||||||||||| Sbjct 7401 GAGACGTACAATCTGCTTTCGGAGCGTTACTTTACCCACGCCTCTCCGACCATGTTTGCG 7342 Query 7684 GCGGGCACAAACGCG-CCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 |||| ||| | ||| ||||| | || || || ||| |||| || ||| || || || Sbjct 7341 GCGGCCACCCA-GCGTCCTCAGCTTTCGTCTTGCTTTCTGCTGACGATGTCGGACGATAG 7283 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGG 7802 ||||||||| || ||| | || || | ||||| || ||||||| | ||| || Sbjct 7282 CATCGACGGTATCTACGATACATTGAAGCAGTGCGCATTGATCTCCAAATCGGCCGGTGG 7223 Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCC---ACCAA 7859 || || ||||| || || | | || || || || | || | | | ||| || || Sbjct 7222 TATCGGGCTGAATGTGCACTGCATCCGTGCGAAGGGAA--CGTA-CATCTCCGGTACGAA 7166 Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919 ||| | | | ||| || | || ||| | || |||| ||| ||| ||| || | || Sbjct 7165 CGGTATTTCGAACGGGTTGGTACCGATGCTACGTGTGTACAACAACACGGCACGGTACGT 7106 Query 7920 AGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACG 7975 || ||||| || ||||| |||||| ||| ||||| | || |||||||||| Sbjct 7105 TGATCAGGGCGGTAATAAGCGGCCAGGCGCGTTTGCTATCTACCTCGAACCGTGGCACG 7047 >seq5576 Length=36905 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||| || || | |||||| | ||| ||||| || ||||| ||||| || || |||||||| Sbjct 18790 CTTACCACCACGGAGTCGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTC 18731 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | ||| | || || ||||| || || || || |||| |||||||||||| || Sbjct 18730 CGACAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGG 18671 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || |||||||| || || ||||| || || || || | ||||| || | || Sbjct 18670 AGGGATGCCTTCCTTATCCTGAATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTC 18611 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| ||||| || ||||| | ||||| |||||||| ||||| Sbjct 18610 GACCTCAAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 18560 >seq5408 Length=43822 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| || || || || || ||||| || || ||||| ||| | ||| | Sbjct 36926 AGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGG 36985 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || || | |||||||||||| ||||| || || || Sbjct 36986 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCC 37045 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | || || || | || || || || ||| Sbjct 37046 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 37105 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| ||||| || | ||||| ||||| || ||||| ||| Sbjct 37106 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 37147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505267160670480