Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3577 313 3e-80 >seq3577 Length=7701 Score = 313 bits (346), Expect = 3e-80 Identities = 1005/1543 (65%), Gaps = 25/1543 (2%) Strand=Plus/Plus Query 68701 AGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTG 68760 ||||| | || || | ||||| || || || | ||||| || |||| | || Sbjct 6041 AGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGAC 6100 Query 68761 GTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATA 68820 || || || || | ||| || || || |||| ||||||||||| || || |||||||| Sbjct 6101 GTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTGGCATC 6160 Query 68821 GGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTC 68880 ||||| | || | || | || |||||| || ||| || || || | ||| | Sbjct 6161 GGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTTCA-ATGCCGC 6219 Query 68881 C-AATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT 68939 | ||| ||| || || | ||| | ||||| | ||||| || ||||| || || || Sbjct 6220 CCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCT 6279 Query 68940 TGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGC 68999 | | | || | || || || || || || |||| | || | ||| || || || Sbjct 6280 TACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCGCAGCTAGC 6339 Query 69000 CTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAG 69059 || || || || || || || ||||| || || | || |||||| | ||| |||| Sbjct 6340 TTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTTGCGCTTGCTC 6399 Query 69060 ACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119 ||| ||| | ||| | | | ||| || ||||| |||| ||||| || || || || Sbjct 6400 ACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCC 6459 Query 69120 GATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATC 69179 ||| || | || | | | || || | || ||||| || | || || || || | || Sbjct 6460 GATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGTAGTTCACGTC 6519 Query 69180 TATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC 69239 || || || |||||||| || ||| | || | || ||||| || || ||||| Sbjct 6520 AATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTCAGCTTCTTGAAATC 6579 Query 69240 AAATCGTCC-ATCTATA---ACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTG 69295 | ||| | ||| |||||||| |||| || | || || | ||| || || | Sbjct 6580 GTA-CGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCAAATTGCACACGG 6638 Query 69296 CTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGA 69352 | || || | | || | || | | |||||| || || || || ||| |||| Sbjct 6639 CCACTTCGTCCTTCGAC---GAGTACTCCACTATCTCAGTGCAAAGGTTCGAACACTTGA 6695 Query 69353 TAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACG 69412 | || || | |||||||| || || || || || || |||||||| || || ||| Sbjct 6696 TGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTACG 6755 Query 69413 GAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA-GCATTTATT 69471 | || ||||| | ||| || ||||| || | ||| | || | | || || | | Sbjct 6756 GTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACA-GATCTTGCGCCTTCACT 6814 Query 69472 ACGGTCTTGTAA--CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTC 69529 | | | ||| || |||| || || || || ||| ||||| || || | Sbjct 6815 T--GACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAACTCTTCGC 6872 Query 69530 CCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCAT 69589 |||| ||| ||||||| ||||| || | || |||||||| ||||| |||| Sbjct 6873 CCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTCATTCG 6932 Query 69590 CCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTC 69649 ||| || || ||||| || ||||| || ||||| ||||| || | || | | | Sbjct 6933 CCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCGAGCGC 6992 Query 69650 TATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCC 69709 | || || || || || ||||| || ||||| |||||||| | | |||| |||| Sbjct 6993 GAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCGTGCC 7052 Query 69710 ATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATC 69769 | ||||| || || || || | | || || || ||||| || |||||||| | ||| | Sbjct 7053 ACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGTACC 7112 Query 69770 TGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTC 69829 || ||||| || || || | |||||||| | | || || || |||| || || | Sbjct 7113 GTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCGTAC 7172 Query 69830 CAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTGC 69887 | || || || |||| | || || || | | | || | | || || || || || Sbjct 7173 CGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GCCCGATACCACCGGC 7230 Query 69888 CATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATC 69947 | ||| ||||| | || || | |||||||| || || ||||| || |||||||| || Sbjct 7231 CGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATGCTATCGTC 7290 Query 69948 TATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAA 70007 ||| | || ||||| || || | ||| || | || |||| ||| | Sbjct 7291 CGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCAAACAT 7350 Query 70008 TGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGA 70067 || ||||| ||||| || || | || |||||||||||||| || || || |||| Sbjct 7351 GGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATCGCTGC 7410 Query 70068 TTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTT 70126 || || ||| | | | || || || || ||||||||||||||||||||||| || | | Sbjct 7411 CTCAATGTCCTCGCCG-TGGATGCCGATGGCGACACGCATCAACATATGCTGCGGCCTCT 7469 Query 70127 CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAAT 70186 | || | || ||||| ||||||| || ||| ||||| |||||||| || |||| Sbjct 7470 CCACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAACCGAAAT 7529 Query 70187 AGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 |||| || |||||| | |||||||| || | |||||||| Sbjct 7530 AGTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686730426957360