Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq4838 91.5 2e-13 >seq4838 Length=6282 Score = 91.5 bits (100), Expect = 2e-13 Identities = 205/307 (67%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 31249 AGCGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATAT 31308 |||| || || || |||||||||||||||||||| |||| ||||| ||||||||||| Sbjct 501 AGCGAGTAGCTTGCGATGTTGAATGGTACACCCAAGCCCACGTCGGCCGATCGTTGATAC 560 Query 31309 AACAAACAGGAAAGTTCATCTCCGGT---CACGTAAAATTGAAATAACACATGACAAGGC 31365 | | || || | | |||||| | || |||||||| || ||||||||| Sbjct 561 ATCTGGCATGATAAT---TCTCCGTTATCAACAAAAAATTGAGCCAAGCAATGACAAGGT 617 Query 31366 GGCAAAGCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAAACGCCGACTG 31425 || | |||||| | | ||||| |||||||| ||||| | | | || ||| | Sbjct 618 GGAAGAGCCATATTGGGGATATCGGTCGGATTCCAGGCGCTCATGATGATTCGACGATCG 677 Query 31426 GTTGGATCACGCTTAATCTCTTCTATCACGGCTGTTATTTGATCGATTCCTTCACCCGTA 31485 || | ||||||| || || || ||| | ||| || || |||| || || Sbjct 678 TACGGGTTGTTTTTAATCTTGTCGATTACCTCTGCAAGTTGGTCTATGCCTTGCCCAGTG 737 Query 31486 TAATTACTATCACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCATAAATA 31545 |||| || || ||||| ||| || || |||||||||||||| || || | | Sbjct 738 TAATCGTCATGGCACGTTTTGTATTTTGCCCCAAAGTGTCGCCATTGAAAACCGTACACA 797 Query 31546 GGTCCCA 31552 || |||| Sbjct 798 GGCCCCA 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512884382154720