Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3577 255 5e-63 seq5408 104 2e-17 seq5576 98.7 8e-16 >seq3577 Length=7701 Score = 255 bits (282), Expect = 5e-63 Identities = 1093/1700 (64%), Gaps = 57/1700 (3%) Strand=Plus/Plus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || ||||| ||||| || || ||||| ||||||||| ||||||||||| |||||||| Sbjct 5702 TTGTCGACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAATAGTACATGCCA 5761 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGGTAATTGGGT 130525 || || | || || || | | | |||||| | | | | ||| |||||| Sbjct 5762 GTCTTCAAACCCATCTTCCACGCGTGAAAGTGGATCGAGGTAAGTTTACCGTAGTTGGGT 5821 Query 130526 TGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCC 130585 | |||||| |||||||| |||||| || || || || || || || | || || ||| Sbjct 5822 TCGGCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCACGATCGGCCGCC 5881 Query 130586 ATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTG 130644 || | || ||| | ||| | ||||||||| | || ||||| ||||| | | || Sbjct 5882 ATTTGGATGCACGTTTTGACCGAA-ATCTCCCAAACCGTTTTGTACAGATCGCGCACGTC 5940 Query 130645 TTTGGGTATGCGCGCAATCGATTGAA-CGCTACCGTTGTTGGCTATAATTTCGTTGCGCA 130703 || ||||| | ||||| || | || | ||||||| || | ||| ||| || Sbjct 5941 CTTTGGTATTTTCTCAATCTTCTGGATCGAT-CCGTTGTGCGCCAGGATTGTGTTCTTCA 5999 Query 130704 TACTTTTATCGT---ACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGA 130760 | || ||||| ||| || || || || || | || ||||| || | | Sbjct 6000 T---TTCATCGTCCCACAGCCCGTGCGCGGTCAGGTCCTTGATCAGATGATGGTTCACAA 6056 Query 130761 TTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGG 130820 ||||| || || | || || |||| ||| | ||| |||| |||| || || | Sbjct 6057 CCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGCTCGAAAG 6116 Query 130821 ATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAG 130880 | ||||||||||| |||||||| || || | || || ||||| ||| | | || | Sbjct 6117 ACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAGTG 6176 Query 130881 AATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGG 130940 | ||||||| || || | | ||| ||| ||||||| | |||||| ||| || | Sbjct 6177 AGTTACGAATCCCATGTTTTGCGATCTTTTCCTTCAATGCCGCCCAATTCCACAGGTCCG 6236 Query 130941 TAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATT 131000 | |||| | ||||||||||| || | || || ||||| || || | |||| || Sbjct 6237 TCGGTT---CCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTTACCGGACAACCTT 6293 Query 131001 CGAACGATTCGTAGAT----TCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCT 131056 || ||| ||||| ||||| | || |||| ||| |||||||||||| || Sbjct 6294 CGTACGTCTCGTACGGCCCATCCTTGG---CG-GCCAATTCGCAGCTAGCTTCCAACGCC 6349 Query 131057 CCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAA 131116 || || || |||||||| ||||| | ||| | | || |||||| | |||||||| Sbjct 6350 CCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTTGCGCTTGCTCACTCTCGTAC 6409 Query 131117 GGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTA 131176 ||||| ||| ||||| || || || || | |||||| | || | ||| | ||| | Sbjct 6410 GGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCGATCGGACGG 6469 Query 131177 TGTTTTAAATT--ACATTTACGCGAACATTCGG--TGGGATAAAGGTTAATGTCAATTAT 131232 || | || | || || | | ||| || || ||| | |||||| || Sbjct 6470 TGGCGCATGTTCGAGCGTTTCG----CTTCCGGCACCGGGTAGTAGTTCACGTCAATGAT 6525 Query 131233 TTTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGT 131292 ||||| | ||||||| ||| || | | ||| |||| || | |||||| |||| Sbjct 6526 CTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTCAGCTTCTTGAAATCGTACGT 6585 Query 131293 GCCAGTTTCGAGGTTTACAAA-TTGATTTACACATATTGACGCCAGATTACAAACTGCCG 131351 | | ||| | | ||||| || | || || || || |||| ||| || || ||| Sbjct 6586 ACGA---TCGGGCTGGACAAACATGTTCAACGCA-ATCGAGGCCAAATTGCACACGGCCA 6641 Query 131352 TTTCGTCATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGT 131409 |||||| | ||| | |||| || || || | ||| | || | ||| ||||| Sbjct 6642 CTTCGTCCT--TCGACGAGTACTCCACTATCTCAGTGCAAAGGTTCGAACACTTGATGGT 6699 Query 131410 GCCCAAATTTTGTTGATTGCTTTTAGCATT-CACATGGTCCTTGTACATCATGTAGGGCG 131468 ||| | ||||| || |||||||| ||| ||| |||||||||| |||||| || Sbjct 6700 GCCGATGTTTTGCTGGTTGCTTTTGCGATTGCAC-GCATCCTTGTACAGCATGTACGGTA 6758 Query 131469 TGCCCGTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTG 131526 ||||||||| || || | || || | | | || | || | | | || || ||| Sbjct 6759 CGCCCGTTTCCACCTGTGACTCGATGA--TCGCAAACCACAGATCTTGCGCCTTCACTTG 6816 Query 131527 ATATTTGTATTGGCCG-CGTTTT---TCGTAATTTTCGTACAACGTTTCAAAGTTTTGGC 131582 | |||| ||| | | | |||||| ||||| | | || || | || || Sbjct 6817 A----CGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAACTCTTCGC 6872 Query 131583 CAAACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCT 131642 | ||||| | |||| |||||| ||| || ||||| | ||||| | ||| Sbjct 6873 CCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTCATTCG 6932 Query 131643 GTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTT 131702 || || |||||||| |||| |||||| | ||| | ||||| |||| || | ||| Sbjct 6933 CCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCGAGCGC 6992 Query 131703 TTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCC 131762 ||| || | || | |||| |||| || | ||| || || | || | |||| Sbjct 6993 GAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCGTGCC 7052 Query 131763 AGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGAC 131819 | ||||| | || | || | |||||| ||| |||||||| |||| ||| | | Sbjct 7053 ACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGTACC 7112 Query 131820 GAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGC 131879 | || |||||||||| || || | ||| || |||| ||||| | | || || || | Sbjct 7113 GTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCGTAC 7172 Query 131880 TCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGT 131939 ||||| | || || || | ||| ||| || || || || ||||| ||| | Sbjct 7173 CGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCAGCCCGATACCACCGGCCG 7232 Query 131940 ATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC-CGCG 131998 |||| ||||| | |||||| | | | || | |||||||| || | ||| || || Sbjct 7233 ATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATGCTATCGTCCG 7292 Query 131999 GCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAACAAT 132058 || ||| | | ||||||||| || | ||| | | ||| | || | ||||| Sbjct 7293 ACATCGTC-AGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCAAACATG 7351 Query 132059 GTGGGGCTGGCGTGTGTAAA 132078 || || |||||| ||||| Sbjct 7352 GTCGGAGAGGCGTGGGTAAA 7371 >seq5408 Length=43822 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | |||| ||| | || || || || || |||||||| ||| | Sbjct 36917 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGAC 36976 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || ||||| || |||||| | ||||||||||| ||||||||||| Sbjct 36977 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 37036 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| |||| | || | || || | || || || Sbjct 37037 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 37096 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || ||||| || ||||| || ||||| ||||| Sbjct 37097 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37143 >seq5576 Length=36905 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || ||||||||||| || | | || | ||||| ||||| || ||| Sbjct 18756 GTGGACTCCTTCTGGATATTGTAGTCCGACAGGGTACGGCCATCTTCCAGCTGCTTTCCG 18697 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| |||||||| || | || || ||||| |||||| ||| Sbjct 18696 GCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCCTGAATCTTGGCCTTC 18637 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | ||||| | || || || || ||||| || | ||||| || || ||| Sbjct 18636 ACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGTGTT 18577 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| || || ||||| Sbjct 18576 TTCACGAAAATCTGCAT 18560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424826813780688