Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq17361 91.5 2e-13 seq15712 87.8 2e-12 >seq17361 Length=8649 Score = 91.5 bits (100), Expect = 2e-13 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 94886 |||||||| || |||||| ||| ||| |||| |||| | ||||| |||||||| || Sbjct 833 GTTGAGGGCATTTTCTTCAGTGGCAGCTT-TGCGGCTATCTTCTGGCTGAAGAAGCGCGG 775 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 94946 || ||||| || || |||||||||||||| ||||| || ||||||||||| ||| Sbjct 774 CCTAATGCCGGGGCTGACGTTCTCCAACGAGCTGATCTCGCGCGACGAGGGACTGCACTG 715 Query 94947 AGAGTTTGC 94955 || ||||| Sbjct 714 TGACTTTGC 706 >seq15712 Length=12775 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 168457 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 168516 |||||| |||||| | | ||||||||||||||||| | ||| | || || ||||| || Sbjct 3414 ATCCTTGCCACCCGTCAACCGCGTACCAAACTGACCGCCCGGATACAGCAGGTTGATGTT 3473 Query 168517 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCG-AGAGAGACT--TC 168573 ||| || | ||||| | ||||| |||| ||||| || | |||| |||| || Sbjct 3474 GTTGCTGCCGACGTAGTTCTGCGCCAGGTTGATGATCGT---CGAGCAGAGCGACTGCTC 3530 Query 168574 ACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTC 168633 ||||| ||||| || | | || || || | |||||||||| ||||| |||| ||| Sbjct 3531 GCCGTGATGGTAAGCGGACATTTCCGCCACCGAACCCGCCAACTGGGCCACCTTCACCTC 3590 Score = 86.0 bits (94), Expect = 7e-12 Identities = 156/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 169348 CTTCCCACGAAGAGGGAAGACACCGTA-GTGATCACGACCAACGACGGAGAGACCCGCGA 169406 ||| || || || || || |||||||| ||| || ||||| || || || |||| | Sbjct 4347 CTTACCGCGCAGCGGAAACACACCGTACGTG-TCGCGACCGACCACCCCCAGCCCCGACA 4405 Query 169407 CTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA-TTTTCCAGATTGT 169465 | || | || || |||||||| |||||||| | |||||||||||| || | |||| Sbjct 4406 CGGCCAACGTTTTGGCCGAGTCTCCCTCGGTCAGGATGAGCGTACAGTTGAGCGAATTGC 4465 Query 169466 GCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAATTTTGGACTTTCGC 169525 | || ||| || | |||||| || |||| || || || || |||| || ||||| | Sbjct 4466 G-CGAACCGGCATCGTTCGCGTCCTCCAGCTTCGGGATGCCCTTAATCTTCGACTTCTTC 4524 Query 169526 GTACCGTCAGATTTTGAGAGTTCCTTCATCTCCTTAAACTTTG 169568 | ||| | ||| | || ||| || | |||||||||||| Sbjct 4525 GAGCCGGACGTTTTGGCCAGATCCGTCTGCGCCTTAAACTTTG 4567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583109341751760