Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3577 282 5e-71 seq17361 95.1 1e-14 >seq3577 Length=7701 Score = 282 bits (312), Expect = 5e-71 Identities = 1143/1759 (65%), Gaps = 70/1759 (4%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || ||||||||||||||||| ||||| | |||| ||||||| ||| | ||| || Sbjct 5741 GTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAGTGGATCGAG 5800 Query 78250 GACAGCTTGGCCAGACTCGGGTTCT-CCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | || || || | | |||||| ||| | ||||||| ||| |||||||||||||| Sbjct 5801 GTAAGTTTA-CCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGACTGGTCGAT 5859 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTG--CGGAATCTCCCAGATG 78366 | |||| || || ||||||||||| | |||| || ||||| || ||||||||| | Sbjct 5860 GAACGCTCCACGATCGGCCGCCATTTGGATGCACG--TTTTGACCGAAATCTCCCAAACC 5917 Query 78367 GTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCC---AGCGCTTGTA-CGCTCCCACC 78422 || ||| | | || || | | || | | | | || | || ||| Sbjct 5918 GTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCAATCTTCTGGATCGATCCGTTG 5977 Query 78423 GGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCA--GCGATTGATCT-TCTGAAGATC 78479 || | || ||| ||||| |||| | || ||| || || | || || || Sbjct 5978 TGCGC-CAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTC---AGGTC 6033 Query 78480 CCGGACCAGGTGCCGGTTAATCA--TGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537 | || ||| || |||| | | ||| |||||||| | || || || |||| Sbjct 6034 CTTGATCAGATGATGGTTCACAACCTGA--AACTCGCCCGAAAGCACTCGTCGGTTGTAG 6091 Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCG 78597 | ||| | ||||||||||||||||| ||||||||| |||| || || || ||||| || Sbjct 6092 ACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGCT 6151 Query 78598 GTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTT 78657 || ||||| ||||| | ||| || || || |||| ||||| | ||||| |||| Sbjct 6152 GTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTTC 6211 Query 78658 AG-GCCGTCCCAAAATTCATTCG-CCG-CGATCCC-----CCACATGTCCGGTTGAAGGA 78709 | |||| || || | || | ||| || | || ||||||||| || || | Sbjct 6212 AATGCCGCCC--AATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAA 6269 Query 78710 TACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTT 78769 | |||| | |||| | || | | |||||||||| | || |||| ||| | || Sbjct 6270 TGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATT 6329 Query 78770 CGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829 |||| | || ||| | | ||| | | || || || || ||||||| Sbjct 6330 CGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTT 6389 Query 78830 GCGCCTTGGTCTCG-TCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGG 78888 |||| ||| || | ||| ||| || ||| | || ||||| ||||||||| |||||| Sbjct 6390 GCGC-TTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGG 6448 Query 78889 ACGCCGATAGCGATCGGTCGGTGGCGCATGTT-GCTC-TTTCGGG-CCGCCTCGGTCGGG 78945 || ||||| ||||||| |||||||||||||| | | ||||| ||| | | |||| Sbjct 6449 ACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCAC---CGGG 6505 Query 78946 TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTAC 79005 || ||||| || |||| ||| || || ||||| |||| | | ||||| | | Sbjct 6506 TAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTC 6565 Query 79006 AATTTGGCGAAATCAAA---ATGATTTCCTTTGATGAAAGTCGGT--AGGCACAGCGATG 79060 | || |||||| | | ||| | || || | | | | ||| | ||| | Sbjct 6566 AGCTTCTTGAAATCGTACGTACGATCGGGCTGGACAAACAT-GTTCAACGCA-ATCGAGG 6623 Query 79061 CCAGGTTGCACACGGCCGTCTCGTCCG--GGCTAGAAACCTCGATGATTTCTGTGCACAA 79118 ||| |||||||||||| |||||| | | || | ||| | || || ||||| | Sbjct 6624 CCAAATTGCACACGGCCACTTCGTCCTTCGACGAGTA--CTCCACTATCTCAGTGCAAAG 6681 Query 79119 ATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTT 79178 || || ||||||||||||||||||| | ||||||||| || || || || ||||| Sbjct 6682 GTTCGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTT 6741 Query 79179 GTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGA-GAACGCCGTCC-CAGATG 79236 ||| ||||||||| || || || ||||| || || || ||| || ||||| Sbjct 6742 GTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATC 6801 Query 79237 TCCCGGGCCCGGACA--ACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACT 79294 | || || || || | | |||||| || ||| |||| | ||||| || Sbjct 6802 TTGCG--CCTTCACTTGACGTA--TAAACCGACACTCTGCCTCGTAACCCGTGTACAGCT 6857 Query 79295 CGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGT 79354 | ||| | || || | ||||| || || || || |||||||||||||||| Sbjct 6858 TCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAAC 6917 Query 79355 GCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGA 79414 ||| || | | ||| || || |||||| || ||||| ||||| || || || Sbjct 6918 TCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGA 6977 Query 79415 AGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCA 79474 | | |||||| || | |||||| | ||| ||| ||| || ||||| || | Sbjct 6978 ACATGTCGCGAGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAA 7037 Query 79475 TGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGC 79534 | || |||||||||| || || ||||| || |||| || ||||| |||| Sbjct 7038 ACACATCACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGC 7097 Query 79535 CCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGG 79594 |||| | |||||||| |||||||||||| | || || ||||| || || | |||| | Sbjct 7098 CCTGATCAACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCG 7157 Query 79595 CGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATT 79653 | |||||||| ||| ||| || || |||| || ||| | ||| | | Sbjct 7158 AAATACCGTTCGTACCGGAGATGTACGTTCCCTTCGCACGGATG-CAGTGCACATTCAGC 7216 Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713 ||||| || |||| | | |||||||| ||||||| ||| | || |||||||| || Sbjct 7217 CCGATACCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCG 7276 Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTA 79773 ||||| |||||| ||| | | ||| ||||| ||| | ||| || | || Sbjct 7277 TCGATGCTATCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTG 7336 Query 79774 CCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG-AACTTTTGGCTC----ATCAGAT 79828 | || || | |||||| | ||||| || ||| ||| |||| | ||||| Sbjct 7337 GCCGCCGCAAACATGGTCGGAGAGGCGTGGGTAAAGTAAC-----GCTCCGAAAGCAGAT 7391 Query 79829 CGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 ||||||||| | | | | ||| |||||||||||||||| ||||| ||||| | Sbjct 7392 TGTACGTCTCGATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCA 7451 Query 79889 AGAGGTACTGGGGCGTCTC 79907 | | | ||| ||| |||| Sbjct 7452 ACATATGCTGCGGCCTCTC 7470 Score = 246 bits (272), Expect = 3e-60 Identities = 907/1396 (65%), Gaps = 35/1396 (3%) Strand=Plus/Minus Query 19097 GAGACGCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCG 19156 |||| ||| ||| | | || ||||| ||||| |||||||||| ||||| ||| | | Sbjct 7470 GAGAGGCCGCAGCATATGTTGATGCGTGTCGCCATCGGCATCCACGGCGAGGACATTGAG 7411 Query 19157 CGAGTCCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACC 19216 || |||||| ||| | ||| | || | ||| || ||||| | |||||| Sbjct 7410 GCAGCGATCGAGACGTACAATCTGCTTTCGGAGCGTTACTTTACCCACGCCTCTCCGACC 7351 Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 | || || | || | || ||| | ||| || || || || | ||| | Sbjct 7350 ATGTTTGCGGCGGCCACCCAGCGTCCTCAGCTTTCGTCTTGCTTTCTGCTGACGATGTCG 7291 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 || || ||||| || || |||||||| || | ||| ||||||| |||||||| | | Sbjct 7290 GACGATAGCATCGACGGTATCTACGATACATTGAAGCAGTGCGCATTGATCTCCAAATCG 7231 Query 19337 TCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGG 19395 |||| ||||||||| | | ||| | ||||| ||| || || ||| || Sbjct 7230 GCCGGTGGTATCGGGCTGAATGTGCACTGC-ATCCGTGCGAAGGGAACGTACATCTCCGG 7172 Query 19396 GACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAG 19455 |||||||| | | |||| | || || ||||| || || | |||||||||||| | Sbjct 7171 TACGAACGGTATTTCGAACGGGTTGGTACCGATGCTACGTGTGTACAACAACACGGCACG 7112 Query 19456 GTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATG 19515 |||||| | ||||| || || || ||| |||| || ||||||||||| || || Sbjct 7111 GTACGTTGATCAGGGCGGTAATAAGCGGCCAGGCGCGTTTGCTATCTACCTCGAACCGTG 7052 Query 19516 GCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCG 19575 ||||| || || | || || || || ||| ||| || | |||||| | || Sbjct 7051 GCACGGTGATGTGTTTGAGTTTCTGGATCTGAAGAAAAACACCGGCAAGGAGGAGGTTCG 6992 Query 19576 CTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAA 19635 | ||||||| | ||| || | ||||| ||||| || |||||| || || ||| Sbjct 6991 CGCTCGCGACATGTTCTACGCTCTCTGGATACCGGATCTGTTCATGAAGCGTGTGGAGGC 6932 Query 19636 GGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGG 19695 | | ||| ||| |||||||||||||||| || || || | |||| | || Sbjct 6931 GAATGAAATGTGGAGTTTGATGTGCCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGG 6872 Query 19696 CGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGT--G 19753 ||| | |||| | || ||||| | ||||| || || | ||||| | | || Sbjct 6871 CGAAGAGTTCGAGAAGCTGTACACGGGTTACGAGGCAGAGTGTCGGTTTA--TACGTCAA 6814 Query 19754 GTCCGGGCCCGGGACGTCTG-GGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACAC 19811 || ||| | || |||| || ||| || || | ||||| || || ||| || Sbjct 6813 GTGAAGGCGCAAGA--TCTGTGGTTTGCGATCATCGAGTCACAGGTGGAAACGGGCGTAC 6756 Query 19812 CGTACATGTGCTACAAGGACGC-CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCG 19870 |||||||| |||||||| || || | ||| || | || ||| | ||||||||| | Sbjct 6755 CGTACATGCTGTACAAGGATGCGTGCAATCGCAAAAGC-AACCAGCAAAACATCGGCACC 6697 Query 19871 ATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCC 19930 ||||||| || ||||| || ||||| || ||||| || | |||||| ||| Sbjct 6696 ATCAAGTGTTCGAACCTTTGCACTGAGATAGTGGAGTACTCGTCGAAGGACGAAGTGGCC 6637 Query 19931 GTGTGTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGTCAAGGCC--TCCT-CCTTCGA 19986 ||||| ||| |||| || | ||| || | || ||| || || || | | | ||| Sbjct 6636 GTGTGCAATTTGGCCTCGAT-TGCGTTGAACATGTTTGTCCAGCCCGATCGTACGTACGA 6578 Query 19987 CTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGA 20046 || || || | ||||| || | |||| ||||| ||||| || |||| || Sbjct 6577 TTTCAAGAAGCTGAAGGAGGTCGCCAAGATCGTAACGCGCAATCTTAACAAGATCATTGA 6518 Query 20047 TCGGAACTTTTACCCGACCGAGGCGG-CGCGCAA--GTCGAATATGCGCCACCGGCCGAT 20103 ||||| |||||| | | ||| ||| || ||||| ||||||||||| ||||| Sbjct 6517 CGTGAACTACTACCCG---GTGCCGGAAGCGAAACGCTCGAACATGCGCCACCGTCCGAT 6461 Query 20104 CGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGA 20163 || ||||| |||||||| ||||||| | ||||| || | ||| | | | ||| Sbjct 6460 CGGCATCGGTGTCCAGGGTATGGCCGATGCGTTCATTTTGATGGGCTTTCCGTACGAGAG 6401 Query 20164 TCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCT 20223 | | |||| ||||||| || || || || || | ||| | | ||| | Sbjct 6400 TGAGCAAGCGCAAAAGCTCAATCAGCAAATATTTGAAACCATCTACTATGGGGC---GTT 6344 Query 20224 GGAATC---GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCC 20280 |||| | |||||| | ||| |||| || ||||||||||||| | | || | || Sbjct 6343 GGAAGCTAGCTGCGAATTGGCCGCCAAGGATGGGCCGTACGAGACGTACGAAGGTTGTCC 6284 Query 20281 CGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGC--GTCACTGA--GA-ATG-AGTT 20334 | | |||| || || ||| ||||||||| | | || || || || | Sbjct 6283 GGTAAGCAAGGGCATTCTGCAGTACGACATGTGGAACAAGGAACCGACGGACCTGTGGAA 6224 Query 20335 TTGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGC 20394 |||| || | |||| ||||| | || ||| |||| ||||| |||| | || Sbjct 6223 TTGGGCGGCATTGAAGGAAAAGATCGCAAAACATGGGATTCGTAACTCACTGCTGCTAGC 6164 Query 20395 GCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTA 20454 || ||||| || || ||||| || || || |||| ||||||||| ||||||||||||| Sbjct 6163 ACCGATGCCAACAGCTTCGACTGCTCAAATATTGGGCAACAACGAGTCTTTCGAGCCGTA 6104 Query 20455 CACGACCAACATCTAC 20470 |||| | ||| ||||| Sbjct 6103 CACGTCGAACGTCTAC 6088 >seq17361 Length=8649 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061 ||| || || || |||||| |||| || ||||| |||||||| || ||||| || Sbjct 834 CGTTGAGGGCATTTTCTTCAGTGGCAGCTTTGCGGCTATCTTCTGGCTGAAGAAGCGCGG 775 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||| |||||||| |||| ||||||||||||||||| || || |||||||| || || Sbjct 774 CCTAATGCCGGGGCTGACGTTCTCCAACGAGCTGATCTCGCGCGACGAGGGACTGCA 718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548382361822560