Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5576 167 3e-36 seq5408 158 1e-33 seq3192 158 1e-33 seq3577 143 3e-29 seq15712 123 3e-23 seq4173 91.5 2e-13 seq17361 89.7 6e-13 >seq5576 Length=36905 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || ||||||||||| || ||||||||||| ||| | Sbjct 18560 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACTCTTGAGGTCGAGCCCTCG 18619 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| ||||||| || |||||||| ||||| || || ||||| || ||| Sbjct 18620 GACACGATCGAAAATGTGAAGGCCAAGATTCAGGATAAGGAAGGCATCCCTCCGGATCAG 18679 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || || |||| |||||||| | ||||| ||| Sbjct 18680 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGTACCCTGTCGGACTACAAT 18739 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||||||||| || || | || || || ||||| Sbjct 18740 ATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGACTCCGTGGTGG 18786 >seq5408 Length=43822 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| ||||| |||||||| ||| | Sbjct 37143 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCG 37084 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||||| || || |||||||||||||| || || || || ||| Sbjct 37083 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGATCAG 37024 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| || || || | || || ||| Sbjct 37023 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAAT 36964 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| || | || || |||||||| Sbjct 36963 ATCCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGG 36917 >seq3192 Length=14073 Score = 158 bits (174), Expect = 1e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471 ||||| || |||||||| || |||||||| || ||||| ||||| ||| || |||| Sbjct 7 ATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCATCGGATACG 66 Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 || | ||| | ||||| || || ||||||||||||||||| |||||||| ||||||||| Sbjct 67 ATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCAGATCAGCAGCGT 126 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 || || || || || ||||| || ||||| | || || || | ||||| || |||| Sbjct 127 CTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAACATCCAG 186 Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||| || || | || | ||| | ||||| ||||||||| Sbjct 187 AAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGCGGTGGA 228 >seq3577 Length=7701 Score = 143 bits (158), Expect = 3e-29 Identities = 707/1093 (65%), Gaps = 58/1093 (5%) Strand=Plus/Plus Query 80695 TCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATC 80754 ||| ||| |||||||||| |||||| | || |||| ||||| || |||||| ||||| Sbjct 6404 TCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCGATC 6463 Query 80755 GGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATG 80814 || ||||||||| ||||||| || | || ||||| | ||||| |||| || ||| Sbjct 6464 GGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGTAGTTCACGTCAATG 6523 Query 80815 ACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA- 80873 | ||| || ||||| || || | | | || || | || |||| || ||| | Sbjct 6524 ATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTCAGCTTCTTGAAATCGTAC 6583 Query 80874 -TTGGTTCCC-CTTCACAAA--TGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCA 80929 | | || || ||||| || || || | || |||| |||||||||||||| Sbjct 6584 GTACGATCGGGCTGGACAAACATGTTC-AACGCA-ATCGAGGCCAAATTGCACACGGCCA 6641 Query 80930 CCTCTTCAGCATC--TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGT 80987 | || || | || | |||| || || || ||||| | || ||| |||| || || Sbjct 6642 CTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTTCGAACACTTGATGGT 6699 Query 80988 ACCCAGGTTTTTCTGGTTTGACTTGGCG-TTGCAAGCGTCCTTGTAGCACATGTACGGGG 81046 || | ||||| |||| ||| || ||| ||||| || |||||||| ||||||||| Sbjct 6700 GCCGATGTTTTGCTGG-TTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTACGGTA 6758 Query 81047 TACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCT 81106 || || || |||||||||| || ||| || ||| | || ||||||| | || Sbjct 6759 CGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTGCGCCTTCA----CT 6814 Query 81107 TGCGGAATTTGCC----TTCGGCCACATACTTGGCGTA-AGCTTCGTCGAA--CTTGGCA 81159 || | || || || ||| | || | ||| |||||| ||||| ||| || Sbjct 6815 TGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTC-TCGAACTCTTCGCC 6873 Query 81160 CCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCG 81219 || ||| || | | | || || |||| |||||||||| ||| | || Sbjct 6874 CCACGAA--TCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCA---CATTTCA 6928 Query 81220 TT---CTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGG 81276 || ||| ||| ||||||||| || || |||||||| ||| ||||| |||||| Sbjct 6929 TTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCG- 6987 Query 81277 CAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCG 81334 |||||| ||||||| | || ||| || || ||||| || | | || Sbjct 6988 -AGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCAC 7046 Query 81335 CATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGC----GACGGCCACCCTGGTTG 81390 | ||||| || || || || | || | || | ||| || | || ||||| | Sbjct 7047 CGTGCCACGGTTCGAGGTAGATAGCAAACG-CGCCTGGCCGCTTATTACCGCCCTGATCA 7105 Query 81391 ACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCG 81450 ||||| || || || ||| | ||||| | ||| || | | || | || |||| Sbjct 7106 ACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCG 7165 Query 81451 TTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGC 81508 |||||||| ||| || ||||| || || | | ||| ||| || ||||| | Sbjct 7166 TTCGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATT--CAGCCCGATAC 7223 Query 81509 CACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGC 81568 |||| | | | || || ||| || ||| | |||| || || || || || ||||||| Sbjct 7224 CACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATGC 7283 Query 81569 TATCTTTTTTCAT-GTCAAGCAAGAAACAGCTTGACATCTGAGG--GCTTTTTGAGCCG- 81624 |||| | ||| ||| |||| || || || | |||||| ||| || |||| Sbjct 7284 TATCGTCCGACATCGTC-AGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTG-GCCGC 7341 Query 81625 -GCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGT 81683 ||| |||| || || | ||||| | || ||||| | || | ||| | || || Sbjct 7342 CGCA---AACATGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGT 7398 Query 81684 TTC-CTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGT 81742 || | | || | ||| || || ||||| || ||||| || |||||||| ||||| | Sbjct 7399 CTCGATCGCTGCCT-CAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATAT 7457 Query 81743 ACTGGGGCGTCTC 81755 ||| ||| |||| Sbjct 7458 GCTGCGGCCTCTC 7470 >seq15712 Length=12775 Score = 123 bits (136), Expect = 3e-23 Identities = 283/424 (67%), Gaps = 4/424 (1%) Strand=Plus/Minus Query 31983 GGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTC 32042 |||||| || ||||| ||||| |||||| | | | ||| ||||| ||| Sbjct 3654 GGACGGGCTGAAGCCGGGCCAGCGGAAGGTGCTGTTTACGTGCTTCAAGCGTAACGACAA 3595 Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102 | | || |||||||||| ||| || |||| | ||||| || | || || || || Sbjct 3594 GCGCGAGGTGAAGGTGGCCCAGTTGGCGGGTTCGGTGGCGGAAATGTCCGCTTACCATCA 3535 Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162 ||||||| ||||||| || || ||||||| || ||||||| ||||| || Sbjct 3534 CGGCGAGCAGTCGCTCTGCTCGACGATCATCAACCTGGCGCAGAACTACGTCGGCAGCAA 3475 Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222 ||| | ||| | || | || || |||||||| || ||| | | ||||||||||| Sbjct 3474 CAACATCAACCTGCTGTATCCGGGCGGTCAGTTTGGTACGCGGTTGACGGGTGGCAAGGA 3415 Query 32223 TGCTGCGAGCTCCCGTTACATCTTCAC--CCGTCTCGCACCTTCGACGCGCAAGATTTTC 32280 | || ||| | | ||||||||||| | ||| ||| |||||| |||||| Sbjct 3414 TAGCGCCAGCCCTAGGTACATCTTCACGATGATGTCGGCCCT--GACGCGGTGCATTTTC 3357 Query 32281 GACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCG 32340 ||||| ||||||| || |||| ||||| | || || ||| ||||| |||| ||| Sbjct 3356 CACCCGCTGGACGATCCGCTGCTGGAGTACCAGTTCGAGGACAACCAGCGTATCGAACCG 3297 Query 32341 GTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACG 32400 | | || ||| | | |||||| | || | |||||||| || || ||||| || Sbjct 3296 ATTTGGTATCTGCCGATCGTGCCGATGCTGCTGATCAACGGTGCGGACGGTATCGGTACC 3237 Query 32401 GGGT 32404 |||| Sbjct 3236 GGGT 3233 Score = 113 bits (124), Expect = 5e-20 Identities = 185/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 31177 GGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGT 31236 || || || ||||| |||| ||| || |||||||| || ||||| ||| |||||| Sbjct 4529 GGCTCGAAGAAGTCGAAGATTAAGGGCATCCCGAAGCTGGAGGACGCGAACGATGCCGGT 4470 Query 31237 ACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTT 31296 | | ||| |||| | | || ||||| || | |||||||| |||||||| || || | Sbjct 4469 TCGCGCAATTCGCTCAACTGTACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTG 4410 Query 31297 GCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGC 31356 || | | || || | || || || ||| | ||| ||| ||||||||||| || || Sbjct 4409 GCCGTGTCGGGGCTGGGGGTGGTCGGTCGCGACACGTACGGTGTGTTTCCGCTGCGCGGT 4350 Query 31357 AAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCC 31416 |||| || ||||| || || || || || ||| | ||| || | || | | Sbjct 4349 AAGCTGCTGAACGTGCGCGAAGCGACCCACAAGCAGATCCTGGAGAACGCGGAAATCAAC 4290 Query 31417 AACCTGAAAAAGATCCTCGGGCTTCAG 31443 ||||||| |||||||||||||| ||| Sbjct 4289 AACCTGATCAAGATCCTCGGGCTGCAG 4263 >seq4173 Length=11039 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| || || || ||||| ||| || Sbjct 10927 ATGCAAATCTTCGTCAAGACTCTGACCGGAAAGACCATCACGCTGGAGGTGGAGCCATCG 10986 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCC 27518 || | ||| | || |||||||||| |||||||| ||||| || || ||||| Sbjct 10987 GACACCATCGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCC 11039 >seq17361 Length=8649 Score = 89.7 bits (98), Expect = 6e-13 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 64772 CTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGA 64831 |||| |||||||| || ||||| ||||| ||||| || ||| |||| || |||||||||| Sbjct 799 CTATCTTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTCCAACGAGCTGA 740 Query 64832 TCTCTCGGGACGAGGGGCTCCACCAAGAATTTGC 64865 |||| || |||||||| || ||| || ||||| Sbjct 739 TCTCGCGCGACGAGGGACTGCACTGTGACTTTGC 706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570162304646880