Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4838 100 3e-16 >seq4838 Length=6282 Score = 100 bits (110), Expect = 3e-16 Identities = 226/337 (67%), Gaps = 2/337 (1%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| |||||||| | || ||||| | ||| || || |||||||| || || || || Sbjct 476 GACATGCGCGATCATATGGGTAAGCAGCGAGTAGCTTGCGATGTTGAATGGTACACCCAA 535 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||| ||| ||||||||||||| | |||||| || | || || || | || | || Sbjct 536 GCCCACGTCGGCCGATCGTTGATACATCTGGCATGATAATTCTCCGTTATCAACAAAAAA 595 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 ||| | | || || || || || ||||| |||| ||| |||| ||||| || Sbjct 596 TTGAGCCAAGCAATGACAAGGTGGAAGAGCCATATTGGGGATATCGGTCGGATTCCAGGC 655 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC-A 6854 || ||| | ||| | | || | ||||| || | ||||||| || | |||| | Sbjct 656 GCTCATGATGATTCGACGATCGTACGGGTTGTTTTTAATCTTGTCGATTACCT-CTGCAA 714 Query 6855 GCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGT 6914 | ||||| || || || | || || | | || | || | |||||||||| Sbjct 715 GTTGGTCTATGCCTTGCCCAGTGTAATCGTCATGGCACGTTTTGTATTTTGCCCCAAAGT 774 Query 6915 GTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 ||| ||| || || ||||| || || ||||| || || Sbjct 775 GTCGCCATTGAAAACCGTACACAGGCCCCAAATCACC 811 Score = 100 bits (110), Expect = 3e-16 Identities = 226/337 (67%), Gaps = 2/337 (1%) Strand=Plus/Minus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || || ||||| || || ||||| || || ||| ||||||||||||| | || | Sbjct 811 GGTGATTTGGGGCCTGTGTACGGTTTTCAATGGCGACACTTTGGGGCAAAATACAAAACG 752 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACCTT 34512 || | | || || | || || || ||||| || |||| | || ||||||| | Sbjct 751 TGCCATGACGATTACACTGGGCAAGGCATAGACCAACTTGCAG-AGGTAATCGACAAGAT 693 Query 34513 GAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCC 34572 || ||||| | || | | ||| | ||| |||| ||||| |||| ||| |||| Sbjct 692 TAAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGACCGATATCCC 633 Query 34573 TCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCT 34632 ||||| || || || || || | | ||||| | || | || || || | Sbjct 632 CAATATGGCTCTTCCACCTTGTCATTGCTTGGCTCAATTTTTTGTTGATAACGGAGAATT 573 Query 34633 GTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGC 34692 || |||||| | ||||||||||||| ||| |||| || || || || |||||||| || Sbjct 572 ATCATGCCAGATGTATCAACGATCGGCCGACGTGGGCTTGGGTGTACCATTCAACATCGC 513 Query 34693 TAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || ||| | ||||| || | |||||||| |||||| Sbjct 512 AAGCTACTCGCTGCTTACCCATATGATCGCGCATGTC 476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448145997461280