Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq17361 158 1e-33 >seq17361 Length=8649 Score = 158 bits (174), Expect = 1e-33 Identities = 471/717 (66%), Gaps = 20/717 (3%) Strand=Plus/Plus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||| || || || || || || || ||||| ||| ||||||||||| || || | Sbjct 529 AGCAACCGATCCGCGACGAACTCGATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGC 588 Query 4434 AATCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | | || || || ||||| | || | ||||| || || || || || || ||| Sbjct 589 A-TGTCGACCGGCAGCGCCTTGGTGAGGAACTCCTGCTCGATCACGACCGCATCGCGGAT 647 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || || | | || ||||| ||||| | || | || | |||| | || || Sbjct 648 GATCTCCGTCACGCGCTCCTTAGACGGTTTCTGCACCAGATACCGGAACATCAGGCAGGC 707 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGG 4611 ||| ||||| |||| || ||||| | || | ||||| ||||| || ||||| | || | Sbjct 708 AAAGTCACAGTGCAGTCCCTCGTCGC-GCGAGATCAGCTCGTTGGAGAACGTCAGCCCCG 766 Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671 |||||| || | ||| || ||||| || ||||| ||||| ||| ||||| |||| Sbjct 767 GCATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCACTGAAGAAAATGC 826 Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-A 4728 | || ||||| || || || || | || |||||| | |||| || | || | | Sbjct 827 CCTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAA---GTTGGCCTTCTTGCTGGAGA 883 Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788 |||| || | ||||||| || || ||||| |||||||| | || | || ||||| | Sbjct 884 TCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTTCGATCGCGTTGA 943 Query 4789 ATAATTTACT-----TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 | | | ||| | ||| ||||| | || || ||||| || || || || Sbjct 944 ACAGAT-ACTCCCGCTCGTTC----GGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTA 998 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 ||||||| || | || || || ||||||||||| ||||| ||||| | || || || Sbjct 999 CATTTCACTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGT 1058 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 || || || || | | || | || || | || |||||||| |||||||| ||| Sbjct 1059 CACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGAGGC 1118 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 || || || || | || || || || |||| | ||| || || || || ||| Sbjct 1119 GGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGTTTGAGCGATTCCCA 1178 Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 || || || || | | || || ||||| || ||||| || || |||||||| Sbjct 1179 GTCTTTCATGTCCTTCGACAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTTCCGC 1235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426941478247742