Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3577 315 1e-80 >seq3577 Length=7701 Score = 315 bits (348), Expect = 1e-80 Identities = 1188/1850 (64%), Gaps = 24/1850 (1%) Strand=Plus/Plus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || || || || || | ||||||||| ||||| || | ||||| |||| ||| || Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 5791 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || || || ||||| || | || ||||| | || || || | ||| || Sbjct 5792 TGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 5851 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA--GGAATTT 76980 || |||||||| ||||| | ||| |||||||||| || || ||||| | ||| | Sbjct 5852 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGT--TTTGACCGAAATCT 5909 Query 76981 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGG 77037 |||||| |||||| | | | | || | ||| | || | || || || | Sbjct 5910 CCCAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCAATCTTCTGGATCG 5969 Query 77038 AACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTA 77097 | || | | | ||||| ||||| || ||||| | ||||| | | || | Sbjct 5970 ATCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTCA 6029 Query 77098 AAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGT 77157 | | | |||||| | || || | ||||| || || || | |||| || ||| Sbjct 6030 GGTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGT 6089 Query 77158 AAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAG 77217 | | || || || || || | ||| || ||||| ||||| ||||||||||| |||| Sbjct 6090 AGACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAG 6149 Query 77218 CAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTT 77277 | |||||||| ||||| | || | || | | |||||| || ||| || || | Sbjct 6150 CTGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCT 6209 Query 77278 TTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAA 77337 | | ||||| ||| || || | ||| | | ||| | ||||| || |||| Sbjct 6210 TCAATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAA 6269 Query 77338 TTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTT 77397 | || || || | | || | || || || || || || || | | || | || Sbjct 6270 TGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATT 6329 Query 77398 CACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 77457 | || || |||||||| || || || || || ||||| || || | || |||||| | || Sbjct 6330 CGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTT 6389 Query 77458 GTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAA 77517 | |||| ||| || ||||| | | | ||| || ||||| || | ||||| | Sbjct 6390 GCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGA 6449 Query 77518 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAAT 77577 | || || || || || | || | | | || || ||| ||||| || | || || | Sbjct 6450 CACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGT 6509 Query 77578 AATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTT 77637 | || | ||| || || || || ||||| | || | || | || ||||| || | Sbjct 6510 AGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTCAGCT 6569 Query 77638 TAAGAAAATCAAATCTTCCATCTATA---ACAAACATGTTCAAAGCTATAGATGCTAGAT 77694 | ||||| | | | ||| |||||||||||||| || || || || | || Sbjct 6570 TCTTGAAATCGTACGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCAAAT 6629 Query 77695 TACAAACTGCTACCTCATTAGCGTTGGCA--TATTGTATTATCTCGGTACATAGATTACT 77752 | || || || || || | | | | | || | | |||||| || || || || Sbjct 6630 TGCACACGGCCACTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTTCGA 6687 Query 77753 ACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAG 77812 ||| ||||| ||||| | ||||| |||||||| || |||||| | ||||| || || Sbjct 6688 ACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAG 6747 Query 77813 AATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC 77872 || |||| || ||||| | |||||| ||||| || | ||| | || ||| || Sbjct 6748 CATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACA-GA-TCTTGC 6805 Query 77873 TTTTATCA-TAGATTTGTAT--CGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAA 77929 | ||| | || | || || | |||| || || || || ||| || || Sbjct 6806 GCCT-TCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAA 6864 Query 77930 TTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTC 77989 || || ||||| ||| ||||||| || || || | ||||||||||| ||| Sbjct 6865 CTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACAT 6924 Query 77990 ACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATC 78049 ||| ||| || || ||||| || ||||| |||||||| ||||| || | || Sbjct 6925 TTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTC 6984 Query 78050 TCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATC 78109 || | | | || || || || || || || || ||||| |||||||| | | ||| Sbjct 6985 GCGAGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATC 7044 Query 78110 AGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATC 78169 | ||||| ||||| || || || || | | || || || |||||||| |||||||| Sbjct 7045 ACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATC 7104 Query 78170 TATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCC 78229 | || | || ||||| || || || | | ||| || | | ||||| || | || Sbjct 7105 AACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACC 7164 Query 78230 ATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATT 78287 || || || || || || |||| | || || || | | | || | ||| || Sbjct 7165 GTTCGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCAG--CCCGATA 7222 Query 78288 CCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATA 78347 || || ||| || || || | ||||| | |||||||||||||||||||| || || Sbjct 7223 CCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATG 7282 Query 78348 CTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 78407 || || ||| ||| | || ||||| || || | ||| || | || | || Sbjct 7283 CTATCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCC 7342 Query 78408 TTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 78467 ||| | |||||||| || || ||||| | || ||||| |||||||| || || Sbjct 7343 GCAAACATGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCG 7402 Query 78468 ATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGA 78527 || |||| || |||||| || || || | || |||||||||||||||||||| Sbjct 7403 ATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGC 7462 Query 78528 GGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 78587 || || || || |||| ||||| |||||||| || ||| |||| ||||||||| Sbjct 7463 GGCCTCTCCACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAA 7522 Query 78588 CCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAG 78637 || |||||||| || |||||| | |||||||| || | |||||||| Sbjct 7523 CCGAAATAGTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694488411879360