Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3577 322 7e-83 >seq3577 Length=7701 Score = 322 bits (356), Expect = 7e-83 Identities = 1184/1847 (64%), Gaps = 18/1847 (1%) Strand=Plus/Plus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || || || || || | ||||||||| ||||| || | ||||| |||| ||| || Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 5791 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || || ||||| || | || ||||| | || || || | ||| || Sbjct 5792 TGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 5851 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA--GGAATTT 75575 || |||||||| ||||| | ||| |||||||||| || || ||||| | ||| | Sbjct 5852 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGT--TTTGACCGAAATCT 5909 Query 75576 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTGTA---TTTTGAATGG 75632 |||||| |||||| | | | | || | ||| | || | || || || | Sbjct 5910 CCCAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCAATCTTCTGGATCG 5969 Query 75633 ATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTA 75692 ||||| | | | ||||| ||||| || ||||| | ||||| | |||| | Sbjct 5970 ATCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTCA 6029 Query 75693 AAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGT 75752 | | | |||||| | || |||| ||||| || || || | |||| ||| ||| Sbjct 6030 GGTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGT 6089 Query 75753 AAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAG 75812 | | || || || || || | ||| || ||||| ||||| ||||||||||| |||| Sbjct 6090 AGACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAG 6149 Query 75813 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTT 75872 | || ||||| ||||| | || | || | | |||||| || ||| || || | Sbjct 6150 CTGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCT 6209 Query 75873 TTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAA 75932 | | ||||| ||| || || | ||| | | ||| | ||||| || |||| Sbjct 6210 TCAATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAA 6269 Query 75933 TTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTT 75992 | || ||||| | | || | || || ||||| | ||| ||||| | || | || Sbjct 6270 TGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATT 6329 Query 75993 CGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTT 76052 |||| || || || ||||| || || || || ||||| || || | || ||| || | || Sbjct 6330 CGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTT 6389 Query 76053 GCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAA 76112 |||||| ||| || | ||| | | | ||| || ||||| || | ||||| | Sbjct 6390 GCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGA 6449 Query 76113 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAAT 76172 | || || || || || | || | | | || || || ||||| || | ||||| | Sbjct 6450 CACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGT 6509 Query 76173 AATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTT 76232 | || | || || || || || ||||| | || | || | || ||||| || | Sbjct 6510 AGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTCAGCT 6569 Query 76233 TGAGAAAATCAAATTTTCCATCTATC---ACAAACATATTAAGAGCTATAGATGCTAGAT 76289 | ||||| | | | ||| | |||||||| || | || || || || | || Sbjct 6570 TCTTGAAATCGTACGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCAAAT 6629 Query 76290 TACAAACGGCTACCTCATTAGCATTGGCA--TATTGTATTATCTCCGTGCATAGATTACT 76347 | || ||||| || || | | | | | || | | |||||| ||||| || || Sbjct 6630 TGCACACGGCCACTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTTCGA 6687 Query 76348 ACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAG 76407 ||||||||| || || | ||||| |||||||| || || || | ||||| || || Sbjct 6688 ACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAG 6747 Query 76408 AACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC 76467 | |||| || ||||| | |||||| ||||| || | ||| | || || Sbjct 6748 CATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTGCGC 6807 Query 76468 TTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTC 76527 || | | | | | | || |||| || || || || | | || || || Sbjct 6808 CTTCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAACTC 6867 Query 76528 ATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACC 76587 || ||||| ||| |||| || ||||| || | ||| |||||||| |||| | Sbjct 6868 TTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTC 6927 Query 76588 ATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647 || ||| || || ||||| || ||||| |||||||| ||||| || | || || Sbjct 6928 ATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCG 6987 Query 76648 GGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGA 76707 | | | || || || || || || || || ||||| || ||||| | | |||| Sbjct 6988 AGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACC 7047 Query 76708 ATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTAT 76767 ||||| ||||| || || || || | | || || || |||||||| |||||||| | Sbjct 7048 GTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAAC 7107 Query 76768 ATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATT 76827 || | || ||||| || || || | | ||| || | | ||||| || |||| || Sbjct 7108 GTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTT 7167 Query 76828 TGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCT 76885 || || || || || |||| ||||| || | | | || | | || || || Sbjct 7168 CGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GCCCGATACCA 7225 Query 76886 CCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTA 76945 || ||| ||| ||||| | || || | |||||||| || ||||| || || || ||| Sbjct 7226 CCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATGCTA 7285 Query 76946 TCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTA 77005 || ||| ||| | || ||||| || || | ||| || | || | || | Sbjct 7286 TCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCA 7345 Query 77006 AACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 77065 |||| || ||||| || || || || | || ||||| |||||||| || || || Sbjct 7346 AACATGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATC 7405 Query 77066 ACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGT 77125 |||| || || ||| || || || | ||||||||||||||||||||||| || Sbjct 7406 GCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGCGGC 7465 Query 77126 CGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 77185 | || ||| |||| ||||| |||||||| || ||| |||| ||||||||||| Sbjct 7466 CTCTCCACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAACCG 7525 Query 77186 AAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 |||||||| || |||||| | |||||||| || |||||||||| Sbjct 7526 AAATAGTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712749268759680