Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5408 140 2e-28 seq5576 136 3e-27 seq3192 120 2e-22 >seq5408 Length=43822 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||| ||||| || |||||| ||||| |||||||||| || ||| | || || Sbjct 36934 CACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGGCCATCCTC 36993 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||| ||||| | |||||||||||| | || | ||| ||||| ||| Sbjct 36994 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTG 37053 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | || || || | || || ||||| | ||||| ||||| Sbjct 37054 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 37113 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || |||||||| ||||| Sbjct 37114 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 37143 >seq5576 Length=36905 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| | |||||||||||| ||| |||||| ||||| ||||| || | || || Sbjct 18777 AGTCGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGGGTACGG 18718 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| ||||| ||||||| |||||||||||| | ||| | |||||| Sbjct 18717 CCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCC 18658 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||||| || | || ||||| | || || ||||| | || Sbjct 18657 TTATCCTGAATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGAGTG 18598 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || ||||| || |||||||| || ||||| Sbjct 18597 ATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 18560 >seq3192 Length=14073 Score = 120 bits (132), Expect = 2e-22 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| |||| || ||| |||| ||||||||||| ||||| || Sbjct 192 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 133 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| |||||||||||||| ||| | || ||||| ||| ||||| ||| | | Sbjct 132 GATCAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 73 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || || || | | || ||||||| || || ||||| || || || |||||||| Sbjct 72 CTCGATCGTATCCGATGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCAC 13 Query 44326 GAAGAT 44331 |||||| Sbjct 12 GAAGAT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359899256505558