Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq4838 98.7 1e-15 >seq4838 Length=6282 Score = 98.7 bits (108), Expect = 1e-15 Identities = 206/301 (68%), Gaps = 12/301 (4%) Strand=Plus/Minus Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAA 50533 ||| ||||| || ||||| ||||||||||||||| |||| ||||| || |||| || Sbjct 812 AGGTGATTTGGGGCCTGTGTACGGTTTTCAATGGCGACACTTTGGGGCAAAATACAAAAC 753 Query 50534 TTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTAT-AACGACGT 50592 ||| | | ||||| || |||||| | || ||||| | | | || || | | Sbjct 752 GTGCCATGACGATTACACTGGGCAAGGCATAGACCAACTTGCAGAGGTAATCGACAAGAT 693 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | ||||| ||||| ||||||| || || | |||| |||||||||||| |||||||| Sbjct 692 TAAAAAC-AACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGACCGATATCC 634 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG----CCACAGACAAT 50708 | | | | | || || |||||| || |||||||| || || || || Sbjct 633 CCAATATGGCTCTTCCACCTTGTCATTGCTTGGCTCAATTTTTTGTTGATAACGGAGAA- 575 Query 50709 GTTTTATCCTGTCA-ATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAA 50767 ||||| || || ||| |||||| |||| || || |||| || || || || ||||| Sbjct 574 ---TTATCATGCCAGATG-TATCAACGATCGGCCGACGTGGGCTTGGGTGTACCATTCAA 519 Query 50768 C 50768 | Sbjct 518 C 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666901977247440