Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2001 105 7e-18 >seq2001 Length=1904535 Score = 105 bits (116), Expect = 7e-18 Identities = 169/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| ||||| || || |||||| ||| ||| | || ||||| || ||||| Sbjct 1559961 ATGTACGTGTCGATCAGCAGCGAGTACATCTCGCTGTGCACATTTTCCATCGCAATCTGG 1559902 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || |||| | || || ||| | ||| |||||| | ||| Sbjct 1559901 AAGCCGTAGAAGCAGCGCGCCTCCGTAACCTGCACCTCCTGGCTGAAGCGTTCCACCAGA 1559842 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||||||||| |||||| ||| || || || |||| | || ||||| | Sbjct 1559841 TTCTCGTTCACGATACCGTCGGACGCAGCAAAGAAGGCCAGCACGTGGGAGATGAAGTGG 1559782 Query 17414 TTTTCGTCCGGTGTAAG-AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTC 17472 |||| |||| | || || | ||| ||||| | ||| ||||| | ||| |||||||| Sbjct 1559781 CGTTCGCTCGGTTTCAGCGACTC-CCAATCCTTCATATCCTTGGACAGATCAACTTCTTC 1559723 Score = 100 bits (110), Expect = 3e-16 Identities = 269/409 (66%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || ||||| || || || || |||| | ||||||||||| || | | | || Sbjct 1560503 ATCGGCCACAAACTCAATGTACTGCGACATCAGATCGCAGTTCATGCCCAGCATATCCAC 1560444 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||| || || | ||||| || ||||| || | ||||| || || || | Sbjct 1560443 CGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCAGGACCGCATCGCGGATGATCTCCGT 1560384 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || || |||| ||||| | || |||| || |||||||| || || || ||||| Sbjct 1560383 CACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGAACATCAGGCAGGCAAAGTCGCA 1560324 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 || | || ||||| | ||| || ||||| || || || | || |||||| || Sbjct 1560323 GTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTCCTGGCATCAGGCC 1560264 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 |||||||| | ||| || ||||||||||| || ||||| |||||||| || | Sbjct 1560263 ACGTTTCTTCAGCCAGAAGATCGCGGCGAAGCTGCCGCTGAAGAAGATACCCTCAACCGC 1560204 Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCA 17156 || || || | | || ||| | | | || | ||| | ||| ||||| ||| || Sbjct 1560203 AGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCT-CGAGATCCAGTTCAGCG 1560145 Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 |||| || || || |||| | ||| || |||||| ||||| || || Sbjct 1560144 CCCAGTCCGCCTTCCGCTTCACGCACGGCAGCGTTTCGATGGCATTGAA 1560096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517527337109640