Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2381 356 3e-93 >seq2381 Length=1337761 Score = 356 bits (394), Expect = 3e-93 Identities = 1202/1854 (65%), Gaps = 32/1854 (2%) Strand=Plus/Plus Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888 || || || ||||| ||||||||||| || ||||| | ||| | |||| ||||| ||| Sbjct 918523 GCTGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAAACCCATCTTCCAGCCGTAGAAA 918582 Query 52889 TGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 52948 || || || || ||| ||| | || || || | || || || | ||||| Sbjct 918583 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 918642 Query 52949 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 53008 |||||||| || || || | ||||| |||||||| ||| ||| || | || ||| Sbjct 918643 TGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 918702 Query 53009 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATAGA 53064 || | ||||| || | |||| ||| || | || | | | ||| | || || Sbjct 918703 CATACCGTTTTGTACAGGTCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 918761 Query 53065 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 53124 |||| | || ||| ||||| || || || ||| | | | ||| || Sbjct 918762 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 918821 Query 53125 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 53184 | | || ||||| | || || || || || || || |||| || | || | |||| Sbjct 918822 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 918881 Query 53185 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 53244 || || || ||||| || | || ||||| || || | |||||| || || || || Sbjct 918882 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 918941 Query 53245 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 53304 |||||||| || |||| || | ||| | || ||||| | | ||| || || || Sbjct 918942 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTT 919001 Query 53305 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 53364 | |||| ||||| ||||||| |||| | || | || Sbjct 919002 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 919061 Query 53365 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 53423 || || || | | || ||| | || || ||||| || || || | || | | Sbjct 919062 GCCCTTGCTCACCGGACTGCCCT-CGTACGTCTCGTACGGACCATCTCGAGCGGCCAACT 919120 Query 53424 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 53483 |||| ||||| || | || ||||| || || |||||||| || | || |||||| | || Sbjct 919121 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTT 919180 Query 53484 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 53543 | || || ||| || | ||||| | || || ||||| || || | ||||| | Sbjct 919181 GAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCA 919240 Query 53544 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 53603 | || || ||||| || || || | | |||| ||| | ||| || || | ||||| | Sbjct 919241 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 919300 Query 53604 AATTAATATCTATAATTTTATTGAGGTTTCT-GACAATTACTTTGACCACATCCTTCAGT 53662 |||| | ||| || ||||| || || || | | || | ||| | | || |||||||| Sbjct 919301 AATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAG-CGACTTCCTTCAGC 919359 Query 53663 TTGAGAAAATCAAA----TTGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAG 53718 || ||| ||| | ||||| || |||||||||||||||| || || || ||||| Sbjct 919360 TTTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCCAG 919418 Query 53719 ATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATTA 53776 ||| || || |||||||||| | || || || | | ||||||||||| | || Sbjct 919419 ATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATCTCAGTGCACAAGTTG 919476 Query 53777 CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 53836 ||| |||||||| || | ||| || || ||||| || || || |||||||| || Sbjct 919477 GAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTAC 919536 Query 53837 AGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGA 53896 || ||| | ||| || ||||| | || ||||| || ||||| ||| | | | Sbjct 919537 AGCATGTACGGCACGCCGGTTTCCACTTGCGATTCGATTATCGCAAACCACAGATCCTGC 919596 Query 53897 GCCTTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAA 53955 ||||| | | | | | | | ||| | ||||| || |||| || || Sbjct 919597 GCCTTCACCTGTCGCATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAA 919655 Query 53956 CTCGTCTCCCCAAACATTGTCCAAT---CCAGGACATTCATCCGGACACATCAACGACCA 54012 ||| || ||||| ||||| || || ||||| || | ||| ||||||| ||| Sbjct 919656 CTCTTCGCCCCAGG---TGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCA 919712 Query 54013 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 54072 | | ||| ||| ||| || | ||| || || || || ||||| || || |||| | Sbjct 919713 CATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCACAGTGCG-TAAA-AC 919770 Query 54073 ATCTCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || || || | | ||||| || || || || || || |||||||| ||| | | Sbjct 919771 ATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAAT 919830 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 ||||| ||||||||| || | || |||| | |||||||||| ||||| || ||| Sbjct 919831 ATATCGCCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTACCGCCC 919890 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 ||||| | ||| | || || || || || || | |||||| || | | ||| || || Sbjct 919891 TGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAACATCGGCACCAGACCGTTTGAA 919950 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 54309 || || || |||||||| || |||| | || |||||| | | | | || || Sbjct 919951 ATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGAATAC-AGTGCACGTTCAGTCC 920009 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 || || || ||| || || |||| || || | || | ||| || ||||||||||| Sbjct 920010 GATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTC 920069 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429 || ||||| || |||| | | || || ||| || | ||| | || || | Sbjct 920070 AATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGGCGCTGCGTAGC 920129 Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 ||| ||| | || || || ||||| ||||| | || || || |||||||| || Sbjct 920130 CGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGT 920189 Query 54490 CTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 54549 |||||| |||| || || ||| ||| || || | || || ||||| | |||||| Sbjct 920190 CTCGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTG 920249 Query 54550 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTT 54609 ||| || | || ||||| || || || ||||||||||| ||| |||||| ||||| Sbjct 920250 CTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 920309 Query 54610 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 ||| || ||||||||||| ||||| || ||||||||||| | ||||| || Sbjct 920310 AAAGCCGAAATAGTTGTACCCGAAGTCCCGATCGTAAATAATGGCCGAGTTCAG 920363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593700649049040