Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2120 107 2e-18 seq2347 104 3e-17 seq224 100 3e-16 seq2514 98.7 1e-15 seq2269 96.9 4e-15 seq2103 95.1 1e-14 seq335 95.1 1e-14 >seq2120 Length=27602 Score = 107 bits (118), Expect = 2e-18 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || || |||||||||| || | ||||||||||||| ||||||||||||||||||||| | Sbjct 26168 ATAAACAATTTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 26227 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||| |||||| Sbjct 26228 TACTGACCACTATACTATCGAGGA 26251 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 3/83 (4%) Strand=Plus/Plus Query 60059 AAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||| ||||||||| | | ||||||||||||| ||||||||||||||||||||| ||| Sbjct 24860 AAAATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 24919 Query 60116 CTCACCACTATACTACCGAGGAT 60138 || |||||||||||| ||||||| Sbjct 24920 CTGACCACTATACTATCGAGGAT 24942 >seq2347 Length=1466857 Score = 104 bits (114), Expect = 3e-17 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 721954 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 722013 Query 60125 ATACTACCGAGGA--TTGAATATATAACTTGAATATTACA 60162 |||||| |||||| |||| ||| ||| || ||| ||||| Sbjct 722014 ATACTATCGAGGAAGTTGATTAT-TAAGTTAAAT-TTACA 722051 Score = 100 bits (110), Expect = 3e-16 Identities = 81/96 (84%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 60052 TTATGAAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110 |||| |||| | || ||| || | ||||||||||||| ||||||||||||||||||||| Sbjct 721014 TTATAAAAATCTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 721073 Query 60111 ACATACTCACCACTATACTACCGAGGA--TTGAATA 60144 ||||| |||||||||||| |||||| ||||||| Sbjct 721074 GGATACTGACCACTATACTATCGAGGACGTTGAATA 721109 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 723562 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 723621 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 723622 TATACTATCGAGGA 723635 Score = 95.1 bits (104), Expect = 1e-14 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 724391 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 724450 Query 60126 TACTACCGAGG-ATTGA 60141 ||||| ||||| ||||| Sbjct 724451 TACTATCGAGGAATTGA 724467 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 || || || | ||||||||||||| | ||||||||||||||||||| ||||| |||||| Sbjct 720127 TCCCCCCGACGGGGAATCGAACCCCGATCTCCCGCGTGACAGGCGGGGATACTGACCACT 720186 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 720187 ATACTATCGAGGA 720199 >seq224 Length=3387546 Score = 100 bits (110), Expect = 3e-16 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 60057 AAAAAT-TTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 |||||| ||||||||| | | ||||||||||||| ||||||||||||||||||||| Sbjct 2720292 AAAAATATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 2720233 Query 60113 ATACTCACCACTATACTACCGAGGAT 60138 ||||| |||||||||||| ||||||| Sbjct 2720232 ATACTGACCACTATACTATCGAGGAT 2720207 Score = 98.7 bits (108), Expect = 1e-15 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||| ||||||||| | | ||||||||||||| ||||||||||||||||||||| | Sbjct 2719983 AAAACATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 2720042 Query 60114 TACTCACCACTATACTACCGAGGAT 60138 |||| |||||||||||| ||||||| Sbjct 2720043 TACTGACCACTATACTATCGAGGAT 2720067 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 169761 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 169702 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 169701 ATACTATCGAGGA 169689 Score = 96.9 bits (106), Expect = 4e-15 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2720730 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2720671 Query 60126 TACTACCGAGGA-TTGAA 60142 ||||| |||||| ||||| Sbjct 2720670 TACTATCGAGGACTTGAA 2720653 >seq2514 Length=1352126 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 60057 AAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||| ||| ||||| || | ||||||||||||| ||||||||||||||||||||| || Sbjct 1083489 AAAAGTTTACTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 1083548 Query 60115 ACTCACCACTATACTACCGAGGA 60137 ||| |||||||||||| |||||| Sbjct 1083549 ACTGACCACTATACTATCGAGGA 1083571 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 60057 AAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||| ||| ||||| || | ||||||||||||| ||||||||||||||||||||| || Sbjct 1085520 AAAAGTTTACTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 1085579 Query 60115 ACTCACCACTATACTACCGAGGA 60137 ||| |||||||||||| |||||| Sbjct 1085580 ACTGACCACTATACTATCGAGGA 1085602 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 810840 TTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 810781 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 810780 ACTATACTATCGAGGA 810765 >seq2269 Length=4330644 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3492085 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3492026 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 3492025 ATACTATCGAGGA 3492013 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 649924 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 649983 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 649984 TACTATCGAGGA 649995 >seq2103 Length=1908487 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 126996 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 127055 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 127056 TACTATCGAGGA 127067 >seq335 Length=3842677 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1507406 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1507347 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1507346 TACTATCGAGGA 1507335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571797421986440