Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2580 140 7e-28 >seq2580 Length=953606 Score = 140 bits (154), Expect = 7e-28 Identities = 269/394 (68%), Gaps = 16/394 (4%) Strand=Plus/Plus Query 253997 CGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCT 254056 ||| || || || |||| | |||| || ||||| || ||||| || || ||||| Sbjct 608749 CGATCTGCCGAATCTGCTGCTGTACGGACCACCCGGCACCGGCAAAACCAGCACAATCCT 608808 Query 254057 GGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAA 254116 |||| ||| || ||||| ||||| | || | |||||| | ||||||||||| Sbjct 608809 GGCGGCGGCGAGACAGCTGTTCGGCGACATGTTCAAG---GAGCGCATTCTCGAGCTGAA 608865 Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGAT 254176 || || ||||| || || | | ||| | ||| ||||| | || || ||| || || | Sbjct 608866 TGCGTCGGACGACCGTGGCATTGCGGTCATTCGCAACAAGGTGAAAACGTTCGCCCAGCT 608925 Query 254177 GTCGAT------TTCGT---CGTTCC--AACCCGGCTGTCCGCCTTTCAAGCTCGTGATC 254225 | || | || || | || || |||||| || ||||| |||| ||| Sbjct 608926 GACGGCGAGCGGTACGCGGACGGACGGAAAGCC--CTGTCCACCGTTCAAAATCGTCATC 608983 Query 254226 CTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAG 254285 ||||| ||||| ||| | |||||| || |||||| ||||||| ||||| ||||||||| Sbjct 608984 CTGGATGAGGCCGACGCGATGACGCACGCAGCGCAGGCCGCCCTGCGCCGCACGATGGAG 609043 Query 254286 ACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCC 254345 | | | | ||| || || || ||||||||||||||||||||| || |||| Sbjct 609044 AAGGAAACGAAAACGACACGGTTCTGTCTGGTGTGCAACTACGTGTCGCGCATTATCGAG 609103 Query 254346 CCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| | | || || || |||||||||| |||| Sbjct 609104 CCGATCACATCGCGCTGTACCAAGTTTCGCTTCA 609137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073727562204864