Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq113 102 6e-17 seq224 89.7 4e-13 >seq113 Length=3238079 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||||||||||||| || |||| | || ||||| || || |||||||| Sbjct 1949116 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAG 1949175 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||| || || || || | || ||||||||| || ||| ||| || | Sbjct 1949176 ATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTC 1949235 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | ||||| | ||| ||||| | || || |||||||| || || || ||||| Sbjct 1949236 TCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACG 1949295 Query 45326 AAGATTTGCATGTT 45339 || || |||||||| Sbjct 1949296 AAAATCTGCATGTT 1949309 >seq224 Length=3387546 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| |||||||| ||||| ||||| ||| ||| | || ||| Sbjct 1793652 ACCAGATGAAGAGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 1793711 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| |||| ||||| || || || || | |||||||||||| Sbjct 1793712 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 1793771 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | | ||| ||| ||||||| || || ||||| Sbjct 1793772 ATCTTTGCCTTGACGTTCTCAATCGTATCCGATGGCTCAACCTCCAGAGTGATGGTCTTT 1793831 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||| ||||| || || ||||| Sbjct 1793832 CCGGTCAGAGTTTTCACGAAAATCTGCAT 1793860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395061607314283