Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2381 883 0.0 seq2001 185 8e-42 seq113 131 1e-25 seq224 120 3e-22 >seq2381 Length=1337761 Score = 883 bits (978), Expect = 0.0 Identities = 1368/1949 (70%), Gaps = 33/1949 (2%) Strand=Plus/Plus Query 22103 GTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 ||||||||||| |||||||| || || ||| |||| || ||||| || ||||| |||||| Sbjct 918490 GTCTTGTCCACCGTAAACTGGATCGCATTTACGGCTGGCTTGGTACGCAGATAGTACATG 918549 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || || |||| |||||||||||| |||| ||||| |||||||||| || ||||| | Sbjct 918550 CCAGTTTTCAAACCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTT 918609 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 ||| | | || | |||||||| || ||||||||||||||| || ||||| ||| Sbjct 918610 GGCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCACCACGATCTGCG 918669 Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 ||||| || || | || || ||| || |||||||| || |||||||| | | || Sbjct 918670 GCCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATT 918729 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTT--T 22400 || |||||| | | ||| | |||| || || || ||| || ||||| | Sbjct 918730 TCCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTG-----GACAGAATTTCGT 918784 Query 22401 TAATCGTATCG---TTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCA 22457 | || | ||| | ||||| ||| ||| ||||||||| | | |||||| |||||| Sbjct 918785 TCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCA 918844 Query 22458 CCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGA 22517 |||| || |||||||| |||| ||||| | | ||||| ||| || ||| |||| |||| Sbjct 918845 CCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGA 918904 Query 22518 AAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTA 22577 | ||||||||||| || || || || || || ||||| ||||||||||| |||||||| | Sbjct 918905 ACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCA 918964 Query 22578 GCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGAT 22637 |||| || | | ||||| || | || || ||| | | | ||||| |||||||| Sbjct 918965 GCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGAT 919024 Query 22638 CGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGC 22697 | || || | |||| |||||| ||||| ||||| | ||| ||| |||| |||| Sbjct 919025 C---CGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGC 919081 Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757 | |||||||| ||||||||||||| | ||||| | || |||||||| |||| ||||| Sbjct 919082 CCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGC 919141 Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACG 22817 |||| || ||||| ||||| |||| || || | | || | |||||||||||| Sbjct 919142 CGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACG 919201 Query 22818 GCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 | ||| ||||||| | |||||| || ||||| || || ||||| || |||||||| | | Sbjct 919202 G-ATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCACGCCGATCCCGATCGGCCTG 919260 Query 22877 TTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTG 22936 | || ||| || || ||||| |||| ||||| |||| ||| || || || Sbjct 919261 TGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTG 919320 Query 22937 TTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCC 22996 |||| || | ||||| | || | | ||||||| || Sbjct 919321 TTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTG 919380 Query 22997 GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056 ||| |||||| |||| | |||||||||||| ||||||||||| || ||||| || Sbjct 919381 TCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATCC 919440 Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116 || |||| |||||| ||||| || || || | ||| ||| || || ||||| | ||| Sbjct 919441 TTCGACGAGTACTCCACAATCTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTC 919500 Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176 |||||| ||||| |||||||| | ||||||||| |||||||||||| ||| || || Sbjct 919501 TGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGCACGCCGGTTTCC 919560 Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG 23236 || ||||| ||||| ||||| ||||| | ||| || | || |||||| | | Sbjct 919561 ACTTGCGATTCGATTATCGCAAACCACAGATCCTGCGCCTTCACCTGTCGCATAAAGCGA 919620 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296 || |||| ||||||| ||||| | || || || | || | ||| | || Sbjct 919621 CCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGC 919680 Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356 ||||| | | ||| ||||| || ||||||||| || || || || ||| Sbjct 919681 CCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACACGCTGCATG 919740 Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || || ||||||||||| || ||||| |||| || || ||||| |||||||| |||||| Sbjct 919741 AACAGGTCCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCG 919800 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 ||||| || |||| ||| | ||| || || | || |||||||||||||||| || | | Sbjct 919801 GTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGGCTCGAGATAGATG 919860 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || || || || | ||| || ||||||||||||||||| || ||||| |||||||| Sbjct 919861 GCGAATGCTCCAGGCCGCTTGTTACCGCCCTGATCGACGTACCGTGCCGTATTGTTGTAG 919920 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCG--CCTACGCCCGCCACACTCGAAC 23594 || | | ||||||||| |||||||| || ||| | || || | | || | Sbjct 919921 ACGCGCAACATCGGCACCAGACCGTTTGAAATCCCGTTCGTA--CCGGAGATGTACGTTC 919978 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | || || |||| ||| |||| | || ||||| ||| |||| || || || | | Sbjct 919979 CCTTCGCGCGAATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGG 920038 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC---TTTGGTCGCGACCA 23711 | || || ||||| ||||||||||||||||| ||||| || || ||||| | || Sbjct 920039 CACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTC---AACA 920095 Query 23712 AGAAACACGAAGACATTT----GCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767 ||| || || || | | ||||| ||||||| |||| |||| || || | Sbjct 920096 GGAAGCAGGACGAAAGCTGGGGGCGCT----GCGTAGCCGCCGCAAACATAGTTGGCGAG 920151 Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC 23827 ||||| |||||||| | | |||| |||||||| || ||||| || ||||| |||||| Sbjct 920152 GCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGATGTCC 920211 Query 23828 TCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACG 23887 || || || || || || || |||||||||| ||||| || || | |||||| | Sbjct 920212 TCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTT 920271 Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947 || || || || | || ||||| |||| || |||||||| || ||||||| || Sbjct 920272 CCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCG 920331 Query 23948 AAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTG 24007 ||||| ||||||| | |||||||| |||| |||| || || | || | ||| Sbjct 920332 AAGTCCCGATCGTAAATAATGGCCGAGTTCAGCCGGTCGGCGTTATCCATTATCACCTTG 920391 Query 24008 TAATGAAAATTCGATATCATCGGCGTTTT 24036 |||||||| | ||| ||||| || | ||| Sbjct 920392 TAATGAAAGTCCGAGATCATGGGAGATTT 920420 >seq2001 Length=1904535 Score = 185 bits (204), Expect = 8e-42 Identities = 301/432 (70%), Gaps = 6/432 (1%) Strand=Plus/Plus Query 57879 CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATC 57935 |||||||| || |||||||| |||| | || ||| ||||| || ||| | | Sbjct 1560093 CTGTTCAATGCCATCGAAACGCTGCC---GTGCGTGAAGCGGAAGGCGGACTGGGCGCTG 1560149 Query 57936 AAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995 || ||||| ||| | ||||| || | |||| || | | || ||||| || || Sbjct 1560150 AACTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTT 1560209 Query 57996 GAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTG 58055 || ||||| ||||| |||||||| || || || || ||| |||||||||| |||||| Sbjct 1560210 GAGGGTATCTTCTTCAGCGGCAGCTTCGCCGCGATCTTCTGGCTGAAGAAACGTGGCCTG 1560269 Query 58056 ATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGAT 58115 ||||| || || || || |||||| |||| ||||||||||| || || || || Sbjct 1560270 ATGCCAGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGAC 1560329 Query 58116 TTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGAC 58175 ||||| ||||| |||| | | | || | || ||| || ||| ||| | ||| Sbjct 1560330 TTTGCCTGCCTGATGTTCAAGTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAG 1560389 Query 58176 ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCC 58235 || ||| ||| |||||| |||||| | ||||| | || | || || ||||||| Sbjct 1560390 ATCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGAT 1560449 Query 58236 ATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTT 58295 ||||| || |||||| ||| ||||||| |||||||||||||||| ||||| | | Sbjct 1560450 ATGCTGGGCATGAACTGCGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTTTG 1560509 Query 58296 TTGCTCGAACTG 58307 ||||||| ||| Sbjct 1560510 CTGCTCGAGCTG 1560521 >seq113 Length=3238079 Score = 131 bits (144), Expect = 1e-25 Identities = 171/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||||||||| |||||||| || || || || ||||| || ||||| | || || || || Sbjct 1949310 AAACATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 1949251 Query 31249 GTCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 || |||| |||| | || || || ||| | ||||||||||||| | || || | Sbjct 1949250 TTCGGACACGATCGAGAATGTGAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCCCCAG 1949192 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 | ||||||||||| || ||||| ||||| ||| |||| || | ||| | ||| | Sbjct 1949191 ATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACT 1949132 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | |||||||| || |||||||| ||||||||||| || |||| | || |||| Sbjct 1949131 ACAACATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTCCGTGGTGGTA 1949078 Score = 93.3 bits (102), Expect = 4e-14 Identities = 166/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || || || || || ||| | || || || || Sbjct 854704 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 854763 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || || | |||| | || || || || ||||||||| || | ||||| || Sbjct 854764 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGAT 854823 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| ||||| ||| |||| || || || ||| || Sbjct 854824 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTAC 854883 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAG 31425 ||||| || || || ||||| ||||||||||| || | ||| | || ||| ||||| Sbjct 854884 AACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGGTGCCAAGAAG 854943 Query 31426 CG 31427 || Sbjct 854944 CG 854945 >seq224 Length=3387546 Score = 120 bits (132), Expect = 3e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245 || ||| ||||| |||||||| || |||||||| || || || |||||| |||| || || Sbjct 1794095 ATAAAATATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTCGA 1794036 Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 ||| ||||| | | || | || || || || ||||||||| || | ||||| Sbjct 1794035 ACCATCCGATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCC 1793976 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || ||||||||||| || |||||||| || ||| |||| || || || || Sbjct 1793975 AGATCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGA 1793916 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| || || || || || ||||||||||| || | ||| | || |||| Sbjct 1793915 CTATAACATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGTCTGCGTGGTGGTA 1793860 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || |||||||| || || || ||||| | || ||||| || || Sbjct 1793860 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACTCTGGAGGTTGAGCCATCG 1793801 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | ||||| || ||| | ||||||||| || | ||||| || || Sbjct 1793800 GATACGATTGAGAACGTCAAGGCAAAGA-TCCAGGACAAGGAGGGAATCCCGCCAGATCA 1793742 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| ||||||| || || || ||||| Sbjct 1793741 GCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAA 1793682 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| |||||||||||||| || Sbjct 1793681 CATCCAGAAGGAATCCACTCTTCATCTGGTGCT 1793649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445750670018160