Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2214 212 9e-50 seq2381 165 1e-35 seq2001 147 3e-30 seq2180 134 2e-26 seq347 118 2e-21 >seq2214 Length=2039847 Score = 212 bits (234), Expect = 9e-50 Identities = 367/533 (69%), Gaps = 3/533 (1%) Strand=Plus/Plus Query 49797 CCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCGAGC 49856 |||| || || | ||||| || ||||||||||| || ||| || |||| | |||| Sbjct 585560 CCGTCGAACCGTCGATGTTCCTGTACATGATGGCGTTTATGCTAACGTCGGTGGTGGAGC 585619 Query 49857 AGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGTGCC 49916 ||||||| | | ||||| |||||||||||||| | |||||||| |||| ||| | |||| Sbjct 585620 AGGCGTTCTTCCTGTACAAAGCGTGCACCGTCGATCATGGCTATTCGCACGAGATTTGCC 585679 Query 49917 ACAACATTAGCCAGTACGATGACATCAACAACCGAGTCCAGCAGACTGTGTCTACATTTC 49976 |||||| |||||| | || ||||| || | |||||| ||| || || |||| Sbjct 585680 TCAACATCGAGCAGTACCAGGATATCAAAAAGCAGGTCCAGGTGACGACCTCGACCTTTC 585739 Query 49977 ATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTGGCCTTTTTCCTAGGAT 50036 ||||||||||| | |||| | |||||||| | | ||||| | || || || Sbjct 585740 ATCAGTGGAACAACATCGCCATGTACGTGGTGCCGATCGTGCTGGCCCTGTTTCTCGGCG 585799 Query 50037 CCTATAGTGATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGACTCGTAGGTAAACTCT 50096 ||| ||||| || || | ||| | |||| | ||||| | || || | Sbjct 585800 CCTGGTCCGATAGACGTGGCCGCAAGCTGCCACTCATCCTCGGACTGATGGGCAAGTTTG 585859 Query 50097 TTTTCTCGGCAATGCTAACCGTAAACAGTCTCAAGAGC---TGGCCCGTAGAGTATATAA 50153 | | ||||| ||| | || |||| | || | | ||||| || ||||| || | Sbjct 585860 TCTACTCGGTCATGATCGTGGTGAACACGCGCATGCCCTCGTGGCCGGTCGAGTACATCA 585919 Query 50154 TCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGCAGCGT 50213 |||||||||| | | ||||| | ||| ||||| ||||| | |||| ||||| | | Sbjct 585920 TCTACACGGCCACGATCCCGAGCGTACTGACCGGGGCCGACATTGCCATCTTCGCCTCCT 585979 Query 50214 GCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGCATCT 50273 ||||||| ||||| |||| | |||| |||||| | |||||||| || | || Sbjct 585980 GCTTTGCGTACATCTCCGACATCACGACGGTGGAGGAGCGCACGCTGCGCATTACGATAC 586039 Query 50274 TGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTAGTGTG 50326 |||| ||| |||||| ||||| ||||| | |||||| ||| |||| | |||| Sbjct 586040 TGGACGCCACCTACCTCAGCACCATGCCGATCGGTGTCGCGCTCGGCAATGTG 586092 >seq2381 Length=1337761 Score = 165 bits (182), Expect = 1e-35 Identities = 376/561 (67%), Gaps = 6/561 (1%) Strand=Plus/Minus Query 96825 GGCCTAGTGCCAATGCTCAGAATGTACAATGCAAT--GTCACGATACGTTACACAGGGCG 96882 || || ||||| ||| | | | ||||| |||| | |||| ||||| ||||||| Sbjct 919943 GGTCTGGTGCCGATGTTGCGCGTCTACAA--CAATACGGCACGGTACGTCGATCAGGGCG 919886 Query 96883 GCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTG 96942 | || || ||||| || || | ||| |||| | || || ||||| | || | || | Sbjct 919885 GTAACAAGCGGCCTGGAGCATTCGCCATCTATCTCGAGCCGTGGCATGGCGATATATTCG 919826 Query 96943 ACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTT 97002 | ||| |||| || |||||| | ||| || |||| || || ||||| |||||| Sbjct 919825 AGTTTCTCGATCTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTT 919766 Query 97003 ATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC-TGGAGC 97061 | ||||| ||| | || || |||||||| |||| || | | || | | |||||| Sbjct 919765 ACGCACTGTGGATACCGGACCTGTTCATGCAGCGTGTGGAGG-CGAACGAAATGTGGAGC 919707 Query 97062 CTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCC 97121 || |||||||| || | ||||| || || || ||||||||||||||| ||| Sbjct 919706 CTGATGTGCCCGCACGATTGTCCCGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAG 919647 Query 97122 AAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAACTG 97181 |||||||| |||||| ||||||| || | || ||| || | || | || ||| Sbjct 919646 CTGTACACGGGGTACGAGAAAGAGGGTCGCTTTATGCGACAGGTGAAGGCGCAGGATCTG 919587 Query 97182 TGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGAT 97241 ||| || || | | || || || || || |||||||| || ||||||||| Sbjct 919586 TGGTTTGCGATAATCGAATCGCAAGTGGAAACCGGCGTGCCGTACATGCTGTACAAGGAT 919527 Query 97242 ACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGC 97301 | ||||| || || ||||| | | | ||||||||||| | ||||| ||||| Sbjct 919526 GCTTGCAATCGTAAAAGTAACCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGC 919467 Query 97302 ACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTC 97361 || || ||||| |||||| | || ||| ||| || || ||| |||||| ||| || Sbjct 919466 ACTGAGATTGTGGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATC 919407 Query 97362 AATCTGCCCAAGTTTGTAGAG 97382 || || ||||||| || Sbjct 919406 GCCTTGAACATGTTTGTAAAG 919386 Score = 127 bits (140), Expect = 3e-24 Identities = 323/489 (66%), Gaps = 2/489 (0%) Strand=Plus/Minus Query 97774 ACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGT 97833 ||||| | | || || ||||| |||| |||||||| |||||| |||| | ||| | Sbjct 918982 ACGGTATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCCACGGCACAAATTC 918923 Query 97834 TTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGT 97893 | ||||| |||||| || || |||| |||||| ||| | ||| | || ||| | || Sbjct 918922 TCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTACAATAGGCGCGTGCTGT 918863 Query 97894 CTGGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGGAACGGC-TCAATCTG 97952 | || ||||| || || ||| || | | | || ||| | | | | |||| Sbjct 918862 CGGGCGAGTTCCAGGTGGTGAACCATCATCTTCTGCAGGATTTG-ACCAACATGGGTCTG 918804 Query 97953 TGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTACC 98012 ||| | |||||| | || ||| ||||||||| || || ||||| ||| | Sbjct 918803 TGGGATCTCGACATGAAGAACGAAATTCTGTCCAACAATGGATCGATCCAAAAGATTGCG 918744 Query 98013 ATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCGACCAAGACG 98072 || ||| | || | ||| | ||||| || || |||||||| || || ||| Sbjct 918743 GCTATACCGCAGGAAATTCGCGACCTGTACAAAACGGTATGGGAGATCTCGGTGAAAACG 918684 Query 98073 CTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATCTG 98132 ||| | ||||| || || | |||| | || || ||| ||||||||||| | Sbjct 918683 TGCATCAAAATGGCCGCAGATCGTGGTGCGTTTATCGATCAGTCGCAATCGTTCAACATT 918624 Query 98133 TACGTTGCCGAGCCCACCTACAGTCGTATGACTTCGATACACTTTTACGCATGGAACAAG 98192 |||| || ||||| | ||| | |||| ||||| || || |||| ||||| | | Sbjct 918623 CACGTCGCGGAGCCAAACTATGGCAAGCTGACGTCGATCCATTTCTACGGCTGGAAGATG 918564 Query 98193 GGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCCACCAATGCCATACCATTT 98252 || | || || ||||||||||||||| | || ||| | ||| ||||| || | ||| Sbjct 918563 GGTTTGAAAACTGGCATGTACTATCTGCGTACCAAGCCAGCCGTAAATGCGATCCAGTTT 918504 Query 98253 ACGGTGGAC 98261 ||||||||| Sbjct 918503 ACGGTGGAC 918495 >seq2001 Length=1904535 Score = 147 bits (162), Expect = 3e-30 Identities = 200/278 (72%), Gaps = 11/278 (4%) Strand=Plus/Plus Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097 |||| | || ||||| |||||||| ||||| || |||||||||||||| || | |||| Sbjct 1559697 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAAGTTGATCTGTCCAAGGATATGAAGGATT 1559756 Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTC 125153 ||||| ||| ||||||| |||||| | || || || ||| | |||||||| Sbjct 1559757 GGGAG--TCG-----CTGAAACCGAGCGAACGCCACTTCATCTCCCACGTGCTGGCCTTC 1559809 Query 125154 TTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTG 125213 ||||| | ||||| || ||||| ||||| |||||| || ||| ||| || ||| || Sbjct 1559810 TTTGCTGCGTCCGACGGTATCGTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTG 1559869 Query 125214 ACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCG 125273 || | |||| | ||||| ||||| ||||| || ||| || || |||||| Sbjct 1559870 CAGGTTACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGC 1559929 Query 125274 GAAATGTACTCTACACTGATTGACATGTACATTCGCGA 125311 || |||||||| ||||| |||| |||||| ||||| Sbjct 1559930 GAGATGTACTCGCTGCTGATCGACACGTACATCCGCGA 1559967 Score = 131 bits (144), Expect = 2e-25 Identities = 235/341 (69%), Gaps = 13/341 (4%) Strand=Plus/Plus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 ||||||||||| || || ||||| |||||||| || || || || || ||||| ||| Sbjct 1560192 GTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGCAGCTTCGCCGCGATCTTCTGG 1560251 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 || ||||| || || || ||||| ||||| || | |||||| | || || || ||| Sbjct 1560252 CTGAAGAAACGTGGCCTGATGCCAGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGAC 1560311 Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGC 125609 || || || ||||| ||||||||| || |||| ||| |||||| |||| Sbjct 1560312 GAAGGGCTGCACTGCGACTTTGCCTGCCTGATGTT---CAAGTATCTG--------GTGC 1560360 Query 125610 AG-ATCCAGCGATGAAAAG-GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAG 125667 || | || ||| | | | || | | || | |||||| || ||| || || | Sbjct 1560361 AGAAGCCGTCGAAGGAGCGCGTGACGGAGATCATCCGCGATGCGGTCCTGATCGAGCAGG 1560420 Query 125668 AGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCG 125727 |||| || || | | || ||||| ||| | |||||||||||| | || |||| Sbjct 1560421 AGTTCCTGACGAAGGCACTGCCGGTGGATATGCTGGGCATGAACTGCGATCTGATGTCGC 1560480 Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG 125768 ||||||| ||||||||||| |||||| | ||| |||| || Sbjct 1560481 AGTACATTGAGTTTGTGGCCGATCGTTTGCTGCTCGAGCTG 1560521 >seq2180 Length=31968 Score = 134 bits (148), Expect = 2e-26 Identities = 315/472 (67%), Gaps = 14/472 (3%) Strand=Plus/Plus Query 127101 TTTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGT 127160 ||| ||| | ||||| ||||| || || || || | | ||||| |||||||| || | Sbjct 16182 TTTCCGGAAGAAGATTACTCCTGCACGGGGGCCCCGTAATGTCTTATGCGTTGTGGTACT 16241 Query 127161 CACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCC-GCAA 127219 |||| || ||| || || || ||||| ||| | |||||| | ||||| | || Sbjct 16242 AACAACATCCGCATATTCGAATGGCGACGGAATCACTCCGGCCGCAA-CTAGCCCAGAAA 16300 Query 127220 TGTGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTC 127279 | ||||| ||||| || | || | | || | | |||||| || ||||| | | Sbjct 16301 TATGTGCCATATCTGCGAACAAATATGCACCATTTTGGTTGGCAATTTCCCGGAACCTTT 16360 Query 127280 TATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATA 127339 | ||||||| | || | ||||| | || || || || | | |||||||| | Sbjct 16361 TGTAGTCCAGACAACGCGAGTAGCACGAAATACCAGCAATAATAACTTTCGGTTTGAAGA 16420 Query 127340 GATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGT 127399 | || |||| | | ||| | || |||| | ||||| ||||| || || | Sbjct 16421 GGCGCGCTGTCTCCTCCATCTTGTCGTAATCGATCAACCCAGTAACTGGATCGACTTTAT 16480 Query 127400 ACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACA-------CG-TTGCG----GAATC 127447 | |||||||||||||| |||| ||||||||| || | || ||| | ||| | Sbjct 16481 ATGGCATGCTTTCGAAGAAGATTGATGTAGCAGATATTTTTTTCGTTTGAGTCATGAAAC 16540 Query 127448 CGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAA 127507 |||| || | || || |||||||| ||||| || |||||||| | |||||||||| || Sbjct 16541 CGTGGGTTAAATGACCACCGTCGGGTAGATCAAGGCCCATGATACGTCCGTGCGGTTCAA 16600 Query 127508 CGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTAC 127559 | |||||||||| ||||| || || || || || |||||||| || Sbjct 16601 TAAGAGCAGTGTACACAGCAAAATTTGCTGGTGAACCAGAATACGGTTGAAC 16652 >seq347 Length=504243 Score = 118 bits (130), Expect = 2e-21 Identities = 241/351 (69%), Gaps = 8/351 (2%) Strand=Plus/Minus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 || ||| |||| || || || || || |||||| | |||| || ||| || | Sbjct 134609 GGGGATTTGGGCCCGGTATATGGGTTTCAGTGGCGCCACTTTGGTGCCACCTACAAAACA 134550 Query 70127 TGCGA-GACAGACTATTCGGGTCAGGGTGTTGATCAATTG-CAGACAATCATTGACACTC 70184 ||| | ||| || || | |||||||| | ||||| || | || | | || |||| Sbjct 134549 TGCCACGAC-GATTACACAGGTCAGGGAATAGATCAGCTGGCTGA-AGTGATCGACAAAA 134492 Query 70185 TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGC 70244 | |||| |||||| ||| | | ||| | |||||| | ||||||||| | ||| | | Sbjct 134491 TTAAGAACAATCCCTACGATCGTCGAATCATCATGTGCGCTTGGAATCCTTCTGATATTC 134432 Query 70245 ACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTAC--TCGTACGATGGCAA 70302 | ||||||||||| || || ||||| ||||| ||||||| | | || ||||| | Sbjct 134431 CTAACATGGCACTACCGCCATGCCACTGCTTGGCACAGTTTTTCGTTAGT--GATGGAGA 134374 Query 70303 ATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACAT 70362 |||| || |||||||| | |||||| | || || || || ||||||||||| Sbjct 134373 GCTGTCGTGTCAGATGTATCAACGTTCGGCCGACGTAGGTCTGGGCGTGCCCTTTAACAT 134314 Query 70363 TGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAA 70413 ||| ||||| || || |||| |||||||| || || | ||||| || || Sbjct 134313 TGCCAGCTACTCCTTGCTGACCCACATGATCGCGCATGTCACCGGACTAAA 134263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741033049873480