Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2192 188 1e-43 seq1785 170 3e-38 >seq2192 Length=1785976 Score = 188 bits (208), Expect = 1e-43 Identities = 202/267 (76%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| || || ||||||||||| || ||||||||||| || ||| Sbjct 931679 GCCAAGCGTCATCGCAAGGTGCTGCGCGATAACATCCAGGGCATCACCAAGCCCGCCATC 931738 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||||| ||||| || || |||||| |||| || || |||| ||||||| Sbjct 931739 CGCCGTCTGGCTCGCCGTGGCGGCGTGAAGCGTATCTCCGGCCTGATCTACGAAGAGACG 931798 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| ||||| | ||||| ||| ||| |||| ||||| || ||| |||||| Sbjct 931799 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGATGCGGTCACCTACACCGAG 931858 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | |||||| | || || || |||| || || ||| Sbjct 931859 CACGCCAAGCGCAAGACGGTCACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 931918 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | || || || ||| ||||| Sbjct 931919 CGTACGCTCTACGGATTCGGAGGTTAA 931945 >seq1785 Length=1114 Score = 170 bits (188), Expect = 3e-38 Identities = 180/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 |||||||| || ||||||||||| || ||||| ||||||||||| ||||||||||| ||| Sbjct 1114 AACATCCAGGGCATCACCAAGCCGGCCATCCGCCGTCTGGCTCGCCGTGGTGGAGTGAAG 1055 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACC 16582 ||| ||||||| || |||| || |||| |||| || ||||| | ||||| ||| | Sbjct 1054 CGTATCTCTGGCCTGATCTACGAGGAGACGCGTGGCGTACTGAAGGTGTTCCTGGAGAAC 995 Query 16583 GTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATG 16642 || |||| |||||| | || |||||||| || || || ||||| ||||| | ||| Sbjct 994 GTGATCCGTGATGCCGTGACGTACACCGAGCATGCCAAGCGCAAGACAGTCACTGCTATG 935 Query 16643 GATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | ||||| || |||| || || ||||| | | || ||||| ||| ||||| Sbjct 934 GATGTTGTCTACGCGCTGAAGCGCCAGGGCCGCACACTGTACGGTTTCGGAGGTTAA 878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072618911339