Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq890 178 1e-39 seq2381 104 2e-17 >seq890 Length=3078589 Score = 178 bits (196), Expect = 1e-39 Identities = 224/305 (73%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||||||||| || || ||||| | || |||| ||| | || ||||| || || | Sbjct 487916 AAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 487857 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | ||| ||||||||||||||||||||||| || |||||||| |||| ||||| Sbjct 487856 ACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAAG 487797 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | ||||| ||| | || ||||| |||||| | |||||||| || || |||||||| | Sbjct 487796 AAGCGCTTGAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCGA 487737 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTC-TTCACGATAGAAGCTTTTTAGAA 71908 |||| || ||||||||||||||| | | |||| | | |||||| ||| || Sbjct 487736 ACGGGTACGTCGGTTGCATGTGG-TCGATCGCGGGCATCCACGATCAGGGCTGGAAGGAG 487678 Query 71909 CGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAAT 71968 || || | ||||| |||||||| || ||||| | | || ||| | || || ||||| Sbjct 487677 CGCGAAATCTTTGGCAAAATTCGGTACATGAACTATGACGGATGCAAGCGTAAATTCAAC 487618 Query 71969 GTGAA 71973 ||||| Sbjct 487617 GTGAA 487613 >seq2381 Length=1337761 Score = 104 bits (114), Expect = 2e-17 Identities = 331/504 (66%), Gaps = 11/504 (2%) Strand=Plus/Plus Query 147447 AGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTA 147506 ||||| || || ||||| || ||||||||||||| || | | ||| | || Sbjct 918832 AGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGAC 918891 Query 147507 GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATG 147566 || ||||||||||||| || ||||| || ||||| ||||| || | ||||||||||| Sbjct 918892 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 918951 Query 147567 TAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCC 147626 || | || | |||||||| | ||||| | || || | | ||| | |||| || Sbjct 918952 GGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTTCAACTCGGCC 919011 Query 147627 CAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAA 147686 |||||||| ||||| ||| || | | ||||||| || |||| || | || Sbjct 919012 CAGTTCCACAGATCCGTCGGTTCCT---TGTTCCACATCTCGTACTGCAAGATGCCCTTG 919068 Query 147687 CTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTT 147746 || | || || || ||||| | ||||| | || | | || | || | | | Sbjct 919069 CTCACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTC-ACAGCT 919127 Query 147747 TGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCT 147804 | ||| || || || || || |||||||| | || | | ||||| | | ||||| Sbjct 919128 CG-CTTCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCT 919186 Query 147805 CTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCG 147863 ||| ||| ||||| || ||| | || | | ||||| ||| || | ||||| | ||| Sbjct 919187 CTTCGCTTTCGTACGG-ATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCACGCCG 919245 Query 147864 ATACCGATGGGTCGGTGTCTGAAATTCGA-TGCTTGAGCGCTAGCCAACGGATAAAAATT 147922 || ||||| || | ||| | | ||| || |||| ||| | || ||||| |||| Sbjct 919246 ATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTT-AGCCTCCGGCACGGGATAGTAATT 919304 Query 147923 CAAGTCGATAATTTTATTGAGATT 147946 | || || ||||| || ||||| Sbjct 919305 GACATCAATGATTTTGTTCAGATT 919328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478645509200560