Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2381 197 4e-45 seq347 102 2e-16 >seq2381 Length=1337761 Score = 197 bits (218), Expect = 4e-45 Identities = 580/882 (66%), Gaps = 14/882 (2%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | || || || ||||| ||||| ||| | ||||| ||||||||||| ||| Sbjct 920279 ATCAAGGGAAAAATCGTCGAGCGCCCCCAGCACATGCTGATGCGCGTTGCTATTGGCATC 920220 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| || ||| | ||||| ||||| || || || || || || | ||| || Sbjct 920219 CATGGCGAGGACATCGATGCAGCGATCGAGACCTACAATCTGCTGTCCGAGCGTTACTTT 920160 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || |||||| ||||||| |||| || | || | || ||| | || || ||| Sbjct 920159 ACCCACGCCTCGCCAACTATGTTTGCGGCGGCTACGCAGCGCCCCCAGCTTTCGTCCTGC 920100 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 || || | | ||| || ||| ||| ||||| |||| ||||| || ||| | ||| Sbjct 920099 TTCCTGTTGACCATGTCCGAAGATAGCATTGAGGGCATCTACGACACGCTGAAGCAGTGT 920040 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACA 363728 || || ||||| ||| || || || || || | | || | ||| | |||| || | Sbjct 920039 GCCCTAATTTCAAAGTCGGCCGGTGGCATCGGACTGAACG-TGCACTGTATTCGCGCGAA 919981 Query 363729 GAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787 | | ||||| ||| || | ||||| || || || ||||| || ||| | || | Sbjct 919980 GGGAACGTACATCTCCGGTACGAACGGGATT-TCAAACGGTCTGGTGCCGATGTTGCGCG 919922 Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847 | | ||||||| || |||||||||| ||||| || ||||| || || || | Sbjct 919921 TCTACAACAATACGGCACGGTACGTCGATCAGGGCGGTAACAAGCGGCCTGGAGCATTCG 919862 Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907 | || ||||||||||| |||| |||||| || |||||||| || || |||||||| Sbjct 919861 CCATCTATCTCGAGCCGTGGCATGGCGATATATTCGAGTTTCTCGATCTGAAGAAAAACA 919802 Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967 | || || ||||| | || ||||| || |||| || ||||| ||| | | |||| | Sbjct 919801 CCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTGTGGATACCGGACCTGT 919742 Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTCC 364025 | ||| |||| |||||||| | | ||| ||| || | ||||| ||||| ||||| Sbjct 919741 TCATGCAGCGTGTGGAGGC--GAACGAAATGTGGAGCCTGATGTGCCCGCACGATTGTCC 919684 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCG 364083 || || || || ||||| || || | | ||| || ||| ||| || Sbjct 919683 CGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTACACG--GGGTACGAGAAA 919626 Query 364084 GAGGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 ||||| | | | |||| | || ||| | || |||||||| || || || || Sbjct 919625 GAGGG-TCGCTTTATGCGACAGGTGAAGGCGCAGGATCTGTGGTTTGCGATAATCGAATC 919567 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 ||| | || || || || || ||| ||||||| ||| | ||||| || || || Sbjct 919566 GCAAGTGGAAACCGGCGTGCCGTACATGCTGTACAAGGATGCTTGCAATCGTAAAAGTAA 919507 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262 ||||||| | | || || || | |||| | || || |||||| | || ||| | Sbjct 919506 CCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGCACTGAGATTGTGGAGTACTC 919447 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 | || ||| || ||||| || || || |||||||| Sbjct 919446 GTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCGC 919405 Score = 107 bits (118), Expect = 5e-18 Identities = 280/423 (66%), Gaps = 8/423 (2%) Strand=Plus/Minus Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 || || |||| |||||| || || | || || ||||| |||||||| || ||||| Sbjct 918986 AAACACGGTATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCCACGGCACAA 918927 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 || ||||| ||||| || | ||||| |||| || || |||| | || || Sbjct 918926 ATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTACAATAGGCGCGTG 918867 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 || || || || || | ||| || || | | || | ||||| | || || || Sbjct 918866 CTGTCGGGCGAGTTCCAGGTGGTGAACCATCATCTTCTGCAGGATTTGACCAACATGGGT 918807 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 ||||||| | | |||||||||| | || | || ||||| || | || || ||| Sbjct 918806 CTGTGGGATCTCGACATGAAGAACGAAATTCTGTCCAACAATGGATCGATCCAAAAGATT 918747 Query 364960 CCAGGATTTCC--AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGC 365017 | | | || || | || | ||| | ||||||| |||||||| || || || Sbjct 918746 GCGGCTATACCGCAGGAAATTCGCGACCTGT--ACAAAACGGTATGGGAGATCTCGGTGA 918689 Query 365018 GAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTA 365077 ||| ||| | ||||| || ||||| ||||| |||||| |||| || ||||| | Sbjct 918688 AAACGTGCATCAAAATGGCCGCAGATCGTGGTGCGTTTATCGATCAGTCGCAATCGTTCA 918629 Query 365078 ACGTATTCATGACTC--AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTG 365135 || ||||| | | | |||||| || | |||||| || || || ||||||||||| || Sbjct 918628 AC--ATTCACGTCGCGGAGCCAAACTATGGCAAGCTGACGTCGATCCATTTCTACGGCTG 918571 Query 365136 GAA 365138 ||| Sbjct 918570 GAA 918568 >seq347 Length=504243 Score = 102 bits (112), Expect = 2e-16 Identities = 218/314 (69%), Gaps = 14/314 (4%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||| ||| | || || || || || ||||| ||||||||||||||||| |||||||| Sbjct 134610 AGGGGATTTGGGCCCGGTATATGGGTTTCAGTGGCGCCACTTTGGTGCCACCTACAAAA- 134552 Query 111548 CATG-CACGACTCATATGATTCA---CAGGGAACTGATCA-ATTACAGAATGTCATTGAT 111602 |||| |||||| || | || ||||||| ||||| | | ||| || || || Sbjct 134551 CATGCCACGAC---GATTACACAGGTCAGGGAATAGATCAGCTGGCTGAA-GTGATCGAC 134496 Query 111603 CAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGC 111661 ||||||||||||| ||| || |||||| || || ||| | || ||||| || || Sbjct 134495 AAAATTAAGAACAATCCCTAC-GATCGTCGAATCATCATGTGCGCTTGGAATCCTTCTGA 134437 Query 111662 ATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACG 111720 | || |||||||| || ||||| || || | || ||||||| || || | Sbjct 134436 TATTCCTAACATGGCACTACCGCCATGCCA-CTGCTTGGCACAGTTTTTCGTTAGTGATG 134378 Query 111721 GGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTA 111780 | ||| || || || |||||||| || || || || | ||||| || || || |||| Sbjct 134377 GAGAGCTGTCGTGTCAGATGTATCAACGTTCGGCCGACGTAGGTCTGGGCGTGCCCTTTA 134318 Query 111781 ATATTGCAAGTTAC 111794 | ||||| || ||| Sbjct 134317 ACATTGCCAGCTAC 134304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303306458107586