Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2381 352 4e-92 seq2001 82.4 1e-10 >seq2381 Length=1337761 Score = 352 bits (390), Expect = 4e-92 Identities = 1201/1854 (65%), Gaps = 32/1854 (2%) Strand=Plus/Plus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || || || ||||| ||||||||||| || ||||| | ||| | |||| ||||| ||| Sbjct 918523 GCTGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAAACCCATCTTCCAGCCGTAGAAA 918582 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 918583 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 918642 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 |||||||| || || || | ||||| |||||||| || ||| || | || ||| Sbjct 918643 TGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 918702 Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATGGA 62106 || | ||||| || | |||| ||| || | || | | | ||| | || || Sbjct 918703 CATACCGTTTTGTACAGGTCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 918761 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62166 |||| | | || ||| ||||| || || || ||| | | | ||| || Sbjct 918762 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 918821 Query 62167 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62226 | | || ||||| | || || || || || || || |||| || | || | |||| Sbjct 918822 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 918881 Query 62227 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62286 || || || ||||| || | || ||||| || || | |||||| || || || || Sbjct 918882 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 918941 Query 62287 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62346 |||||||| || |||| || | ||| | || ||||| | | ||| || || || Sbjct 918942 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTT 919001 Query 62347 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62406 | |||| ||||| ||||||| |||| | || | || Sbjct 919002 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 919061 Query 62407 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62465 || || || | | || ||| | || || ||||| || || || | || | | Sbjct 919062 GCCCTTGCTCACCGGACTGCCCT-CGTACGTCTCGTACGGACCATCTCGAGCGGCCAACT 919120 Query 62466 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62525 |||| ||||| || | || ||||| || || |||||||| || | || |||||| | || Sbjct 919121 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTT 919180 Query 62526 GCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 62585 | || || ||| || | ||||| | || || ||||| || || | ||||| | Sbjct 919181 GAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCA 919240 Query 62586 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62645 | || || ||||| || || || | | |||| ||| | ||| || || | ||||| | Sbjct 919241 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 919300 Query 62646 AATTAATATCTATAATTTTATTGAGATTTCT-GACAATTACTTTGACCACATCCTTCAGT 62704 |||| | ||| || ||||| || ||||| | | || | ||| | | || |||||||| Sbjct 919301 AATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAG-CGACTTCCTTCAGC 919359 Query 62705 TTGAGAAAATCAAA----TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAG 62760 || ||| ||| | | | | || |||||||||||||||| || | || ||||| Sbjct 919360 TTTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCCAG 919418 Query 62761 ATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATTA 62818 ||| || || |||||||||| | || || || | | ||||||||||| | || Sbjct 919419 ATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATCTCAGTGCACAAGTTG 919476 Query 62819 CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 62878 ||| |||||||| || | ||| || || ||||| || || || |||||||| || Sbjct 919477 GAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTAC 919536 Query 62879 AGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGA 62938 || ||| | || || ||||| | || ||||| || ||||| ||| | | | Sbjct 919537 AGCATGTACGGCACGCCGGTTTCCACTTGCGATTCGATTATCGCAAACCACAGATCCTGC 919596 Query 62939 GCCTTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAA 62997 ||||| | | | | | | | ||| | ||||| || |||| ||||| Sbjct 919597 GCCTTCACCTGTCGCATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAA 919655 Query 62998 CTCGTCTCCCCAAACATTGTCC---AGTCCAGGACATTCATCCGGACACATCAACGACCA 63054 ||| || ||||| ||||| || || ||||| || | ||| ||||||| ||| Sbjct 919656 CTCTTCGCCCCAGG---TGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCA 919712 Query 63055 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63114 | | ||| ||| ||| || | ||| || || || || ||||| || || |||| | Sbjct 919713 CATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCACAGTGCG-TAAA-AC 919770 Query 63115 ATCTCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || || | | ||||| || || || || || || |||||||| ||| | | Sbjct 919771 ATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAAT 919830 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 ||||| ||||||||| || | || ||||| | |||||||||| ||||| || ||| Sbjct 919831 ATATCGCCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTACCGCCC 919890 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 ||||| | ||| | || || || || || || | |||||| || | | ||| || || Sbjct 919891 TGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAACATCGGCACCAGACCGTTTGAA 919950 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 63351 | || || || || ||||| || |||| | || |||||| | | | | || || Sbjct 919951 ATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGAATAC-AGTGCACGTTCAGTCC 920009 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || ||| || || |||| || || | || | ||| || ||||||||||| Sbjct 920010 GATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTC 920069 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471 || ||||| || |||| | | || || ||| || | ||| | || || | Sbjct 920070 AATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGGCGCTGCGTAGC 920129 Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531 ||| ||| | || || || ||||| ||||| | || || || |||||||| || Sbjct 920130 CGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGT 920189 Query 63532 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63591 ||| || |||| || || ||| ||| || || | || || ||||| | |||||| Sbjct 920190 CTCGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTG 920249 Query 63592 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63651 ||| || | || ||||| || || || |||| |||||| ||| |||||| ||||| Sbjct 920250 CTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 920309 Query 63652 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 ||| || ||||||||||| ||||| || ||||||||||| ||||||| || Sbjct 920310 AAAGCCGAAATAGTTGTACCCGAAGTCCCGATCGTAAATAATGGCCGAGTTCAG 920363 >seq2001 Length=1904535 Score = 82.4 bits (90), Expect = 1e-10 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 32970 TTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTA 33029 ||||| || || || || || ||||||||||| | ||||| |||| ||| || || Sbjct 1559919 TTTTCCATCGCAATCTGGAAGCCGTAGAAGCAGCGCGCCTCCGTAACCTGCACCTCCTGG 1559860 Query 33030 CAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 33089 | || ||||| | | ||| || ||||| || ||||| || ||||| || |||| Sbjct 1559859 CTGAAGCGTTCCACCAGATTCTCGTTCACGATACCGTCGGACGCAGCAAAGAAGGCCAGC 1559800 Query 33090 ACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTA 33149 || || || || | |||| ||| | || | |||||| || ||||| || Sbjct 1559799 ACGTGGGAGATGAAGTGGCGTTCGCTCGGTTTCAGCGACTCCCAATCCTTCATATCCTTG 1559740 Query 33150 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 || | ||| ||||||||||| ||||| || || || || |||| Sbjct 1559739 GACAGATCAACTTCTTCCACCGTCCAGAAGGAAGCTTCCGCCT 1559697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633609640710800