Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq890 150 2e-31 >seq890 Length=3078589 Score = 150 bits (166), Expect = 2e-31 Identities = 221/308 (72%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 50979 ATCCACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAAT 51038 || |||||| || |||||||| || || | |||||||| |||| ||| ||||||| || Sbjct 487612 ATTCACGTTGAATTTACGCTTGCATCCGTCATAGTTCATGTACCGAATTTTGCCAAAGAT 487671 Query 51039 TTTGCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACAT 51097 || ||| || || | | |||| ||||| | || || |||||||| ||||| || | Sbjct 487672 TTCGCGCTCCTTCCA-GCCCTGATCGTGGATGCCCGCGATCGACCACATGCAACCGACGT 487730 Query 51098 AATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCA 51157 | ||| |||||||| ||||||| ||||| ||||||| ||| | || || | | Sbjct 487731 ACCCGTTCGGATCGCGCCCATCCAGACTGTAGCGATCGTTCAGATAGATCGCCGTCTCAA 487790 Query 51158 ATGCCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGT 51217 || || | | |||||| |||| || || ||||||||||||||||||| | Sbjct 487791 GCGCTTCTTCGGGCGTTTTCGTCCACTCCAGGATCTTTTTGGCCCAGTACATGCGCAGGA 487850 Query 51218 AACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTC 51275 | ||||||||||||||||| || | | |||| || ||||||||||||| ||||| Sbjct 487851 AGCCGTGCATCTTGCCCTCCTTCACC--ATCTGCAGCTGGGCCGAGTTCCACAGATCGTC 487908 Query 51276 GTGAGTTT 51283 || |||| Sbjct 487909 ATGCGTTT 487916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433313091214745