Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq2269 96.9 9e-17 >seq2269 Length=4330644 Score = 96.9 bits (106), Expect = 9e-17 Identities = 222/332 (67%), Gaps = 7/332 (2%) Strand=Plus/Minus Query 3198 CTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTAT 3257 ||||||| |||| |||||||||||||| ||| ||||| | ||||||| | || | Sbjct 66147 CTGCGAGGTGCTGAACTTTGTCAACGTGCTCGGCCAGATCTACTTCATGGACTTTTTCCT 66088 Query 3258 AGGCGAAGACTTTTTGTTGTACGGAATCTATGTTACCTTCTTCAACCAG--GAAGCCGCC 3315 | || || || | |||||| | | |||| ||||| | || | ||||| Sbjct 66087 CGACGGCGAGTTCTCCACGTACGGTAGCGATGTGGTGCGCTTCACCGAGATGGAGCCGGA 66028 Query 3316 CATCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTT 3375 || | | ||| ||| ||| ||| ||||| || | | || ||||| || Sbjct 66027 G----GAGCGCGGCGA-CCCGATGGCGCGCGTCTTCCCCAAGGTGACCAAGTGTACCTTC 65973 Query 3376 CACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAG 3435 ||||| |||||||| || ||| || | || | ||| || || ||| | || ||| Sbjct 65972 CACAAGTACGGTCCGTCCGGCAGTGTGCAGAAGTTCGACGGTCTGTGCGTGCTGCCGCTC 65913 Query 3436 AACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATC 3495 ||| | || ||||||||||||||| | ||||| |||||||||||| | |||| ||||| Sbjct 65912 AACATCGTGAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTCATCCTGCTCACCATC 65853 Query 3496 ATCAGCGGTATCGTTGTTCTGTACCGCATTGC 3527 | | || ||| | |||||||| |||| Sbjct 65852 CTGACTGGCATCTCGCTGATGTACCGCTTTGC 65821 Score = 80.6 bits (88), Expect = 7e-12 Identities = 96/128 (75%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAG-TCTCCATCGACAATGTATTCTTCCGGTTG 2733 |||||||||| | | ||||| | ||| | | ||||||||| |||||||| || Sbjct 66670 CCGTGAAGGGTCTGCTGAAGCTAG-ACCAGGTGTGCATCGACAACAACATCTTCCGGCTG 66612 Query 2734 CATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAG 2793 || ||| | ||||||||||| || |||||||| || ||||||| || ||||||||| Sbjct 66611 CACTACAAAGCGACCGTGATCATACTGATCGCGTTCTCGCTGCTGGTCACCTCGCGGCAG 66552 Query 2794 TACTTCGG 2801 ||| |||| Sbjct 66551 TACATCGG 66544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479614660500