Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq113 118 9e-22 seq224 95.1 1e-14 >seq113 Length=3238079 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| |||| || || | ||| | || ||||| || ||||||||||| ||| Sbjct 1949078 TACCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGG 1949137 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | ||| ||| ||| || || || || || ||| |||| |||||||| || || || | Sbjct 1949138 AGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGG 1949197 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 |||||||||| ||||| |||||| || | | || | ||||| | | |||| Sbjct 1949198 GAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGA 1949257 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 | || | || | || |||||||| || ||||| || |||||||||||| Sbjct 1949258 CCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 1949307 >seq224 Length=3387546 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | ||| | || || || || || ||||| || || Sbjct 1793859 ATACCACCACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCC 1793918 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| || || || || |||||| |||| |||||||| || || || Sbjct 1793919 GACAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGC 1793978 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| || |||| | |||| Sbjct 1793979 GGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCGGATGGTTCG 1794038 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || |||||||||||||| || ||||||||||| Sbjct 1794039 ACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 1794088 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || ||||| || || || || || |||||| || || || ||| Sbjct 1793664 GTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 1793723 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| || || || || || || || ||||| |||||| || Sbjct 1793724 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTG 1793783 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | || || |||| || | || || |||||||||||| Sbjct 1793784 ACGTTCTCAATCGTATCCGATGGCTCAACCTCCAGAGTGATGGTCTTTCCGGTCAGAGTT 1793843 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 1793844 TTCACGAAAATCTGCAT 1793860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420119945144676