Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2325 100 3e-16 seq2001 89.7 6e-13 >seq2325 Length=2510080 Score = 100 bits (110), Expect = 3e-16 Identities = 197/289 (68%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 171881 GTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTG 171939 |||||||||||||| | | ||| || ||||||||| | || ||||| || || || Sbjct 543150 GTGAAGATGTACCTGGGGCTGG-CGCTGTCCTTGCCACCCGTCAGCCGCGTACCGAACTG 543208 Query 171940 ACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 171999 ||| | ||| | | |||||||| ||||| || | ||||| | |||| |||| Sbjct 543209 ACCGCCCGGGTACAACAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 543268 Query 172000 AATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGC 172059 ||||| ||| || | || |||||||||||||| ||||| ||||| || | | Sbjct 543269 GATCGTGGAGCAGAGCGACATCTCGCCGTGATGGTAGGCGGACTTTTCCGCCACTGAACC 543328 Query 172060 CGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGAC 172119 |||| ||| |||||||||| ||| |||| || | |||||||| |||| || Sbjct 543329 GGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTCACGCTTGAAGCACGTGTACAGCAC 543388 Query 172120 CTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 172168 ||| | ||| ||||| | ||||| |||| || ||||| ||| Sbjct 543389 CTTGCGCTGGCCCGGCTTCAACCCGTCCAGCATGCACGGAATGGAGCGC 543437 >seq2001 Length=1904535 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || || ||||| || ||||| || || ||||||||| ||||| Sbjct 1560335 GGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTCC 1560276 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||| || || || ||||||| |||||| ||||| || || ||||||||| Sbjct 1560275 TGGCATCAGGCCACGTTTCTTCAGCCAGAAGATCGCGGCGAAGCTGCCGCTGAAGAAGAT 1560216 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| || ||||| || | || ||||| ||||| | | ||| | | Sbjct 1560215 ACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCTCGAGAT 1560156 Query 126226 CCACTTCATCGCCCACTGCGCCTT 126249 ||| |||| |||||| | |||||| Sbjct 1560155 CCAGTTCAGCGCCCAGTCCGCCTT 1560132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597332520884840