Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq113 132 5e-26 seq2381 123 2e-23 >seq113 Length=3238079 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || ||||| ||||||| |||||||| || ||||||||||| || | Sbjct 1949079 ACCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGA 1949138 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || || |||||||||||||| | || || |||||||| || || || Sbjct 1949139 GAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 1949198 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || ||| ||| ||| ||| | || || | || || Sbjct 1949199 AATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGAC 1949258 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||||||||| | ||||| |||||||| ||||| || Sbjct 1949259 CTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTT 1949309 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| ||||||| ||||| || || || |||||||| || | Sbjct 854934 ACCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 854875 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || |||||||||||||| | || || |||||||| || || || Sbjct 854874 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGG 854815 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||| || || || || || || ||| ||| ||| | ||||| || || || Sbjct 854814 GATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 854755 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||| || || | ||||| ||||| || ||||| || Sbjct 854754 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 854704 >seq2381 Length=1337761 Score = 123 bits (136), Expect = 2e-23 Identities = 286/431 (66%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130 ||| |||||||||||||||| |||||||| | ||||| || || | || || ||||| Sbjct 918892 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 918951 Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190 |||| || || || || || | ||||||||| || || || || || ||| Sbjct 918952 GGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTTCAACTCGGCC 919011 Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250 || ||||||| | || |||| | ||||||||| ||||| ||||| | ||| ||| Sbjct 919012 CAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTC 919071 Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCT 154310 |||||||| | || | |||||| || | | ||||| || || || ||| Sbjct 919072 ACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCT 919131 Query 154311 TCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCA 154370 || | ||| | ||||| | |||||| ||||| | |||| | ||| || | || Sbjct 919132 TCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCG 919191 Query 154371 CTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCA 154430 ||||||||||| | | || | || |||||||| | ||||| | ||| | || Sbjct 919192 CTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCACGCCGATCCCG 919251 Query 154431 ACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATATCG 154490 | || ||||| | ||| || || || || || ||||| ||||||| ||| Sbjct 919252 ATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCA 919311 Query 154491 ATAATTTTATT 154501 || ||||| || Sbjct 919312 ATGATTTTGTT 919322 Score = 118 bits (130), Expect = 1e-21 Identities = 581/911 (64%), Gaps = 29/911 (3%) Strand=Plus/Plus Query 154625 GTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATT 154684 ||| | |||||| || | |||||| || ||| |||||||| | || | ||| || Sbjct 919449 GTACTCCACAATCTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTT 919508 Query 154685 CGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGT 154744 ||| ||||| || || ||||||| |||||||| ||| ||||||||||| | Sbjct 919509 ACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGCACGCCGGTTTCCACTTGCGA 919568 Query 154745 TTCAATAATTGTGCGAA--ACAGACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCG 154802 ||| || || || || ||||| |||||| || || | |||| ||| || Sbjct 919569 TTCGATTAT--CGCAAACCACAGATCCTGCGCCTTCACCTGTCGCATAAAGCGACCCTCT 919626 Query 154803 CTCTCATATTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGA 154862 |||| || |||||| || || |||||| | | |||||| | |||||| Sbjct 919627 TTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGA 919686 Query 154863 CAGCGGTCGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAA 154922 || || || ||||||| |||||||||||| | || || | ||| |||| Sbjct 919687 CAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAGG 919746 Query 154923 TCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTT 154982 ||||| | ||||| ||||| |||| || || || || || ||| ||||| Sbjct 919747 TCCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTT 919806 Query 154983 CGCTTTAAATTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATC 155042 ||| | || | ||| || |||| ||| | ||||||||||| | ||| | ||| | Sbjct 919807 TTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGGCTCGAGATAGATGGCGAAT 919866 Query 155043 GCGCCTTTGCG---TTTTCCTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGC 155099 || || || || || || ||||| |||| || | ||| ||||| |||||| Sbjct 919867 GCTCCAGGCCGCTTGTTACCGCCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGC 919926 Query 155100 AACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCC----ACGTATCG--CGCTGC-C 155152 |||| || ||| ||| | | | ||||| || || | ||| || | || | | Sbjct 919927 AACATCGGCACCAGACCGTTTGAAATCCCGTTCGTACCGGAGATGTA-CGTTCCCTTCGC 919985 Query 155153 GCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCCGCCGTATTTAGATATTTGCGC 155212 |||| || || || || | || | || ||| | | || || ||| | || Sbjct 919986 GCGAATAC------AGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGC 920039 Query 155213 ACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAA 155272 ||| | | || || ||||| || || | ||||| ||||| || ||||||| ||| Sbjct 920040 ACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAA 920099 Query 155273 ACACGAAGATAATTGAGGTTG-AGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTG 155331 || || || | || || | | | |||| |||||||| | || || ||||| | Sbjct 920100 GCAGGACGAAAGCTGGGGGCGCTGCGTAGCC-GCCGCAAACATAGTTGGCGAGGCGTGGG 920158 Query 155332 TAAACATTTTGTTGGCGGTTA--AG-TTGTAAGTTTCGATGGCGGCGTCAATGTCACGAC 155388 |||| | | | ||| | || ||||| || ||||| || || || ||||| | Sbjct 920159 TAAA-GTAACGCT--CGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGATGTCCTCGC 920215 Query 155389 CGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGT 155448 | || || || || || ||||||||||||||||| || |||||| | | || | Sbjct 920216 CATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCT 920275 Query 155449 TGATGCGCTTTAAGTACCCATTTTCCAAAGTTTTATACGCAAAATACTTGTATTCGTAGT 155508 |||| | ||||| |||||| |||||| | | ||||| ||||| || ||| Sbjct 920276 TGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGT 920335 Query 155509 CTCGTTTGTAA 155519 | || | |||| Sbjct 920336 CCCGATCGTAA 920346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499627168784120