Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2214 109 4e-19 seq2269 82.4 6e-11 >seq2214 Length=2039847 Score = 109 bits (120), Expect = 4e-19 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| ||||||| |||||| || || | ||| |||| | |||||||| Sbjct 33631 GCCGGGTTCGGGGTGACGGGCGGCGTACACCGCCTCTGGTGCCACCGGTCGTACAAGGCG 33690 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| |||| | || || |||||||| ||| Sbjct 33691 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTCGATCGCCGGCCAGAACACGATC 33750 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | |||||||||||||| || |||| | || ||| Sbjct 33751 TACGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAAACGAACGGTGATCCA 33810 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||||| ||| |||| ||| || | ||||||| || ||||| ||| || |||| | Sbjct 33811 CACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTGCGCAAGCAT 33870 Query 108580 CCCGA 108584 || || Sbjct 33871 CCGGA 33875 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 ||||| | ||||| ||||||||||||||||| ||||||||||| | ||||||||||| | Sbjct 36125 TGGCTATGGGCGAAGGATGGCACAACTACCATCACGTGTTCCCGTGGGACTACAAGGCAG 36184 Query 108941 CCGAGTTGGGGAACGACT 108958 ||||| |||| ||| ||| Sbjct 36185 CCGAGCTGGGCAACTACT 36202 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| || |||||||| | ||| ||| | ||||| ||| || |||||||| Sbjct 39619 GCCGGGTTCGGCGTTACGGCCGGTGCCCACCGGCTCTGGACGCACCGGGCGTACAAGGCG 39678 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| || || | || ||||||| | | Sbjct 39679 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTGTCTGTCCGGCCAGAACAGCCTG 39738 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | |||||||||||||| || ||| |||||||| Sbjct 39739 TTCGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAGACGGATGCCGACCCG 39798 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569 |||||| | ||| |||| |||| | | | ||||| || ||||| |||| Sbjct 39799 CACAACTCGAACCGGGGCTTCTTCTACGCCCACGTCGGCTGGCTGCTGAT 39848 >seq2269 Length=4330644 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929 |||||| |||| || | ||||| || |||||||||||||| ||||||||||| | || Sbjct 3487288 GGTGGCTTCGTTCGCGTTTGGCGAAGGTTGGCACAACTACCATCACGTGTTCCCGTGGGA 3487347 Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957 ||||||| | |||||| |||| ||| || Sbjct 3487348 CTACAAGACGGCCGAGCTGGGCAACTAC 3487375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381759664987512