Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2001 262 4e-65 seq113 143 3e-29 >seq2001 Length=1904535 Score = 262 bits (290), Expect = 4e-65 Identities = 315/428 (74%), Gaps = 0/428 (0%) Strand=Plus/Minus Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 ||| |||| |||| | |||||||| ||||| ||||| |||||||| ||||| || Sbjct 1560521 CAGCTCGAGCAGCAAACGATCGGCCACAAACTCAATGTACTGCGACATCAGATCGCAGTT 1560462 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830 | ||||||| | ||||||||| || | || || || |||||||| |||||| Sbjct 1560461 CATGCCCAGCATATCCACCGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCAGGACCGC 1560402 Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACAT 132890 ||| || ||| ||| | |||||| || |||| ||||||| || ||||||||| Sbjct 1560401 ATCGCGGATGATCTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGAACAT 1560342 Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGT 132950 || ||| ||||||||||| |||| || ||||| | || || || ||||| ||| || Sbjct 1560341 CAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGT 1560282 Query 132951 CAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAA 133010 | || ||||| ||||| ||||| || ||||| || || |||||||| ||||| || Sbjct 1560281 GAGTCCTGGCATCAGGCCACGTTTCTTCAGCCAGAAGATCGCGGCGAAGCTGCCGCTGAA 1560222 Query 133011 GAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCT 133070 ||||| ||||| || || ||||| ||||| | |||||||| || |||| | ||||| Sbjct 1560221 GAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCT 1560162 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | ||||||| ||||||||| || ||||| || |||||||||| |||||||||||| Sbjct 1560161 CGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCGCTTCACGCACGGCAGCGTTTCGATGGC 1560102 Query 133131 GTTCAACA 133138 || |||| Sbjct 1560101 ATTGAACA 1560094 Score = 161 bits (178), Expect = 1e-34 Identities = 206/281 (73%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 133148 TCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGT 133207 |||||| |||| || | ||| |||||||| || ||| ||||| || ||| || | Sbjct 1559978 TCTCTTTCGAGTCGCGGATGTACGTGTCGATCAGCAGCGAGTACATCTCGCTGTGCACAT 1559919 Query 133208 TCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAG 133267 | ||||| || || || |||||||| ||||| |||||||| |||||||| || || Sbjct 1559918 TTTCCATCGCAATCTGGAAGCCGTAGAAGCAGCGCGCCTCCGTAACCTGCACCTCCTGGC 1559859 Query 133268 CGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCA 133327 ||| || || |||||||| ||||| ||||| |||||| || || || |||||||||| Sbjct 1559858 TGAAGCGTTCCACCAGATTCTCGTTCACGATACCGTCGGACGCAGCAAAGAAGGCCAGCA 1559799 Query 133328 CGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGCGTGTCCTTG 133386 |||| |||||| ||||| ||| | |||| ||| |||||| || | | |||||| Sbjct 1559798 CGTGGGAGATGAAGTGGCGTTCGCTCGGTTTCA-GCGACTCCCAATCCTTCATATCCTTG 1559740 Query 133387 GACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||| || || || || || ||||| || || || || || Sbjct 1559739 GACAGATCAACTTCTTCCACCGTCCAGAAGGAAGCTTCCGC 1559699 >seq113 Length=3238079 Score = 143 bits (158), Expect = 3e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| ||||| ||||| |||||||| | || |||||| | Sbjct 1949310 AAACATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 1949251 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | || | ||| |||| ||||| || || |||||| | || Sbjct 1949250 TTCGGACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGA 1949191 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||||| Sbjct 1949190 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 1949131 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| || |||||| |||| || ||| |||||||||| Sbjct 1949130 CAACATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCG 1949092 Score = 136 bits (150), Expect = 4e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| |||||||| || ||||| ||| | || |||||| || Sbjct 854704 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 854763 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359 | || | | | | | || | || |||| ||||| |||||||| |||||| || Sbjct 854764 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGA 854822 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| ||||| |||||||| || | ||||| || |||||| Sbjct 854823 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTA 854882 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| |||| || ||| |||||||||| Sbjct 854883 CAACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCG 854921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500155150152320