Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 369 5e-97 seq14 269 3e-67 seq2392 105 8e-18 seq2001 96.9 4e-15 >seq3 Length=930003 Score = 369 bits (408), Expect = 5e-97 Identities = 814/1210 (67%), Gaps = 14/1210 (1%) Strand=Plus/Plus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || |||| || || ||||| || |||||||| | || | ||| || || || || Sbjct 115947 GTCTCGATACCGAGCGACAGCGGGGTCACGTCGAGCAGCAGCAGATCCTGCACC---TCC 116003 Query 7004 TTCC-CTTCAC-CCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCA 7060 | | ||| | |||| || |||||||| || |||| || ||||| ||||| ||||| Sbjct 116004 TCCGACTTGTCGCCGTGCAGGATGGCGGCCTGCACCGCGGCACCGTACGCGACGGCCTCG 116063 Query 7061 TCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGA 7120 || ||||| || | || |||| || || ||||| || | ||| | || | || Sbjct 116064 TCCGGGTTGATAGACTTGTTCAACTCCTTGCCGTTGAAGAAGTCCTGCAGCAGCTTCTGC 116123 Query 7121 ATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCG 7180 | |||||||| || ||||||||||| |||| ||||| || | | ||| || || Sbjct 116124 ACCTTCGGGATGCGCGTCGATCCACCCACCAGCACGATGTCGTGGATGCTCGCCTTGTCC 116183 Query 7181 ATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCAT 7239 ||||| | ||| || || | || ||||| || ||||| | | | ||||||| ||| Sbjct 116184 ATCTTGGCGTCGCGCAGCGCCTTCTCGACCGGCTCCAT-CGTCGAGCGGAACAGGTCGGC 116242 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 ||| ||||| || || || || || || || || |||||||| || ||| | | Sbjct 116243 GTTCAGCTCCTCGAAGCGGGCGCGCGTGATCGAGGTGTAGAAATCGGTTCCCTCGAACAG 116302 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 |||||| || |||||| | | || | || ||| || | ||| ||||| |||||||| || Sbjct 116303 CGAATCGATCTCAATGCTCGCCTGCGTCGACGACGAGAGCGTGCGCTTCGCGCGCTCGCA 116362 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 |||||| || | || || ||||| ||| ||| ||| | ||| ||||| || || || Sbjct 116363 CGCCGTGCGCAGTCGGCGCAGGGCGCGCTTGTTGGTGGACAGATCCTTCTTGTGCTTGCG 116422 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || || || | | |||||| | || | ||||| || ||||| |||| || Sbjct 116423 CTTGAATTCCTGTGCGAAGTGGTTCACCAGACGGTTGTCGAAGTCCTCACCGCCCAGATG 116482 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||||| ||||| || ||||| || | || ||| | | ||| || Sbjct 116483 GGTGTCTCCGGCGGTCGACTTGACCTCGAAGATGCCATCGTCGATGGACAGGATCGACAC 116542 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599 || || || || || || || || || || || ||||| || || | | ||||| Sbjct 116543 GTCGAAGGTGCCGCCGCCGAGATCGAAGATCAGCACGTTGCGCTCACCGGCGGTCTTCTT 116602 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || |||||||||||||| || ||||| || || || || || || || || |||||| Sbjct 116603 GTCCAGACCGTACGCGATGGCGGCCGCGGTCGGCTCGTTGATGATGCGCAGCACGTTCAG 116662 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || | || || | ||||| |||||||| || || ||||| ||||| |||||||| || Sbjct 116663 TCCCGAGATGGTACCGGCATCCTTCGTCGCCTGGCGCTGCGAGTCGTTGAAGTAGGCTGG 116722 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 || || | ||| |||| ||| || |||| || || || | ||| || | || ||||| Sbjct 116723 CACGGTGATGACGGCGTTCGTCACCGTCTTGCCCAGGTAGGCTTCGGCCGTTTCCTTCAT 116782 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAA 7839 ||||| || |||||||| | ||| || | || ||| | || || || | Sbjct 116783 CTTGGTCAGCACCATCGAGCTGACCTCCTCCGGGAAGAAGCACTTCTTCTCGCCCTTGTA 116842 Query 7840 ATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTT 7899 || || | ||| | || || || | | | | |||| ||| ||| | || Sbjct 116843 CTCGACCGCGATCTTTGGCTTGCCCTC-GATC--GACTCCACCTCGAACGGCCAGTGCTT 116899 Query 7900 CATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAA 7959 ||| ||| | |||| | | || ||||| | ||||| || ||||| ||||| || Sbjct 116900 CATGTCGGCCTGGATCGCGGGATCGTCGAACTTGCGGCCGATCAGTCGCTTGGCATCGAA 116959 Query 7960 AACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019 | |||||| ||||||||||||| |||||||| |||||||| ||||| || || || Sbjct 116960 GATGGTGTTTGTGGGGTTCATGGCCACCTGGTTCTTGGCCGCGTCACCGATGAGGCGCTC 117019 Query 8020 ATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAAT 8079 | |||| |||||| || || || || |||| || || |||||||| ||||| Sbjct 117020 ---CGTGTCCGAAAACGCAACATAGCTCGGTGTGGTTCTGTTGCCCTGGTCGTTGGCAAT 117076 Query 8080 AATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAAT 8139 ||| || || | ||| || | || ||||| || || || || || | ||| || Sbjct 117077 AATCTCCACCTTGCCGTGCTGAAACACTCCGACACAGCTGTAGGTCGTGCCCAGATCGAT 117136 Query 8140 ACCGATTGCT 8149 ||||||||| Sbjct 117137 TCCGATTGCT 117146 >seq14 Length=697429 Score = 269 bits (298), Expect = 3e-67 Identities = 584/869 (67%), Gaps = 6/869 (1%) Strand=Plus/Plus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 ||||||| || || ||||| || |||||||||| || | ||| || || || | ||| Sbjct 240995 GTTTCGATGCCCAGCGACAGGGGCGTCACGTCCAGCAGCAGCAGATCCTGGACCGCTTCC 241054 Query 7004 TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 | || ||| | ||||||||| || || | |||||||| ||||| ||||| || Sbjct 241055 GACGTGTCGCCCTGCAGGATGGCGGCCTGCACGGCGGCCCCGTACGCGACGGCCTCGTCC 241114 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 ||||| |||| ||| ||||| || || ||||| || | ||| | || | || | Sbjct 241115 GGGTTGATCGATTTGTTCAGCTCCTTGCCGTTGAAGAAGTCCTGCAGCAACTTCTGCACC 241174 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || || || || |||||||||||||| | ||||| || | | | | || || ||| Sbjct 241175 TTGGGAATGCGGGTCGATCCACCGACGAGCACGATGTCGTGGATGCTGGCCTTGTCCATC 241234 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACA--GGTTCCATACATTTACGGAACAAGTCCATAC 7241 || | || || || | || ||||| || ||||| | ||||||| |||| | Sbjct 241235 TTGGCATCGCGCAGCGCCTT--CGACACCGGCTCCATCGTGTCGCGGAACAGGTCCGAAT 241292 Query 7242 ACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACG 7301 || ||||| || || || | || || || || |||||||| | ||| ||||| | || Sbjct 241293 TGAGCTCCTCGAACCGGGCCCTCGTGATCGAGGTGTAGAAATCGATGCCCTCGTACAGCG 241352 Query 7302 AATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 | || || || ||| | | || | | || || | ||| |||||||| ||||| || | Sbjct 241353 AGTCGATCTCGATGCTGGCCTGGGTGGACGCGGACAGCGTGCGCTTTGCCCGCTCGCAAG 241412 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 |||| || || || || || || ||| ||| | | ||| || ||||| || || || | Sbjct 241413 CCGTGCGCAATCGGCGCAGCGCGCGCTTGTTGCTCGTAATGTCCTTCTTGTGCTTGCGCT 241472 Query 7422 TAAACTCTTCAGAGAAGTGTCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| || ||||| ||| | | | || || || || || || | || Sbjct 241473 TGAACTCCTCGACAAAGTG-CGACACCATGCGGTTGTCAAAGTCCTCGCCGCCGAGATGG 241531 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || |||| || || ||||||||||| | || || | | | ||| || Sbjct 241532 GTGTCGCCGGCCGTCGACTTCACCTCAAAGATACCGTCCTCGATCGTGAGGATCGACACG 241591 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600 || || ||||| || || || || || || || |||||| ||| || | ||||| Sbjct 241592 TCGAAGGTACCGCCGCCGAGATCGAAGATAAGCACGTTCCGCTCGCCGGCCCCCTTCTTG 241651 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 || || |||||||| || || |||||||| || || || || || || || ||||| Sbjct 241652 TCCAGCCCGTACGCAATGGCGGCCGCCGTCGGCTCGTTGATGATGCGCAGCACGTTCAAC 241711 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || | | ||||| ||||| || ||||| || || || ||||| || || Sbjct 241712 CCGGCGATCGCACCGGCATCCTTCGTGGCCTGTCGCTGGCTGTCATTGAAGTACGCTGGA 241771 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 ||||| | |||||| | | | || | || || || | ||| || | || |||||| Sbjct 241772 ACCGTGATGACCGCATTCTTCACAGAGTGTCCCAGGTATGCTTCGGCCGTTTCCTTCATT 241831 Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||||| || |||||||| || | ||| || Sbjct 241832 TTGGTCAGCACCATCGAAGACACCTCCTC 241860 >seq2392 Length=1603593 Score = 105 bits (116), Expect = 8e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 ||| | | |||| || | ||||||||||| || |||||||| || || ||||| | || Sbjct 7891 GTCCTCGCTCTTGTCCATACCGTACGCGAGCGCGGCCGCCGTCGGCTCGTTAATCACGCG 7950 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 || ||||||||| || || ||||||| |||||||| || || || |||||||| Sbjct 7951 CAGCACGTTCAGGCCCGCGATCTGACCCGCATCCTTCGTCGCCTGGCGCTGGGAATCGTT 8010 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 ||||| ||||| ||||| | |||||| | | |||| Sbjct 8011 GAAGTACGCCGGCACCGTAATGACCGCATTCTTGAC 8046 >seq2001 Length=1904535 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || |||||||| || || ||||| ||||| || || || || || || || ||| Sbjct 860546 TTCTACCAGGCATCGACGTCCGAGCTGTACGGCAAGGTGGCGGAGACGCCCCAGAACGAA 860605 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGG--- 22560 || || ||||| || || || || || || | | || || || || || ||| Sbjct 860606 AAGACCCCGTTCTATCCCCGCTCGCCGTACGCGTGTGCCAAGATGTACGGCTACTGGATT 860665 Query 22561 GCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAAC 22620 | || | || ||| | ||| | |||| ||||| || ||||| || || ||||||| Sbjct 860666 GTGA---TCAACTATCGCGAAGCGTACGACATGTTCGCCTGCAACGGCATCCTGTTCAAT 860722 Query 22621 CACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAA--CACTCGGTG 22675 ||||| || ||| | ||||| || ||||||||||| || ||||| | | ||||||| Sbjct 860723 CACGAGTCGCCGCGCCGGGGGGAGAACTTCGTGACGCGCAAAATCACCCGCTCGGTG 860779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635110387751320