Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2001 98.7 1e-15 seq702 91.5 2e-13 >seq2001 Length=1904535 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 ||||| ||||| || | ||||| || |||||||||||||||||| || ||| Sbjct 1560176 CTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGCAGCTT 1560235 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 | ||| || | ||||| ||||| || || || |||||||| ||| |||||| ||||| Sbjct 1560236 CGCCGCGATCTTCTGGCTGAAGAAACGTGGCCTGATGCCAGGACTCACCTTCTCGAACGA 1560295 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| ||||| || ||||| || || ||| || ||||| Sbjct 1560296 GCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTGC 1560334 >seq702 Length=496488 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 |||||| || || || ||||| || ||| | || |||||| || ||| | || || || Sbjct 401408 CTATGGCCGAGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGTGGGCGC 401467 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT--GGA 163663 ||||| | || |||||| |||| | ||| ||| || || ||||||||| ||| Sbjct 401468 CGGTGTCGTCGACGAGGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCATTCGGA 401527 Query 163664 GACAAAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACA 163704 |||||| |||||| || |||| ||||| ||||||||||| Sbjct 401528 GACAAA--CTTTGAAGTTAAGAAAGGGGATCGCATCGCACA 401566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620720495552560