Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq702 111 2e-19 seq2047 89.7 6e-13 >seq702 Length=496488 Score = 111 bits (122), Expect = 2e-19 Identities = 130/174 (75%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 158472 AGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGT 158531 |||||| ||||| || ||||| || ||||| |||||||| ||||| ||| ||| | || Sbjct 401402 AGGATGCTATGGCCGAGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGT 401461 Query 158532 TGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA 158591 || || || ||| |||| || || || | ||| ||| || || |||||||| Sbjct 401462 GGGCGCCGGTGTCGTCGACGAGGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCA 401521 Query 158592 T--GGAGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTT 158643 | |||||||| ||||||| |||||||| || ||||||||||||||| || || Sbjct 401522 TTCGGAGACAA--ACTTTGAAGTTAAGAAAGGGGATCGCATCGCACAGTTTATT 401573 >seq2047 Length=4985541 Score = 89.7 bits (98), Expect = 6e-13 Identities = 314/480 (65%), Gaps = 14/480 (3%) Strand=Plus/Plus Query 11497 ATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTT 11556 |||| |||||||| || || || || || || || | || || || || || ||||| Sbjct 1076148 ATCTGCCGATCGAAGCGGCCCGGTCGCAGCAGCGCCTTGTCGAGGATGTCCACCCGGTTG 1076207 Query 11557 GTAGCGGCAATGACTACAATGCCAGTC-TCAT--TGTCGAAACCGTCCATTTCTGTGAGA 11613 || ||||| | || || | || || | | ||| ||| |||||||| || || Sbjct 1076208 GTGGCGGCCAGCACGACCA---CATTCGTGGTCGTGTTGAACCCGTCCATCTCCACCAGC 1076264 Query 11614 AGCTGGTTGATCGTCTGTTCAC--GCTCATCGTTGGAGGGCATACCACCTGCCGAA-CGC 11670 |||||||| | || ||||| | |||| || || | | | | ||||| ||| Sbjct 1076265 AGCTGGTTCA--GTGTGTTCTCCTGCTCCGAGT-GGCCGCCGAAGCTTTTGCCGCCGCGC 1076321 Query 11671 TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 || ||||| || || || || |||||||| | || ||||| ||| || ||| Sbjct 1076322 TTTCGTCCGACCGCATCGATTTCGTCGATGAAGAGAATGCACGGCGCGTTCTTGCGGGCC 1076381 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 |||| | || ||||| ||| || ||| || || || ||||| || | || | Sbjct 1076382 ATGGCGAACATGTCGCGTACGCGCGACGGTCCCACGCCGACAAACATTTCCAAAAACTCC 1076441 Query 11791 GCGGCAGAACACTG-AATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | | || ||| | ||||||||| || || | || || || |||| ||||| || Sbjct 1076442 GACCCGGA-CACGGTAATGAAGGGTACGTTCGCTTCCCCTGCCGTGGCCTTCGCGAGCAG 1076500 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACT 11909 || ||||||||||| || | || | || | |||||| ||| ||||||||||| Sbjct 1076501 CGTTTTACCCGTACCGGGCGGTCCGGTCAGCATGGCGCCCTTGGGAATCTTGGCACCGAG 1076560 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | | ||| ||| || || |||||||||| |||| |||| || ||| |||||| Sbjct 1076561 ATCGATGTATTGCTGGGGGTTTTTGAGGAAGTTGACAAACTCCATAATTTCGATCTTGGC 1076620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588955216509400