Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2381 141 1e-28 seq702 86.0 7e-12 >seq2381 Length=1337761 Score = 141 bits (156), Expect = 1e-28 Identities = 440/673 (65%), Gaps = 15/673 (2%) Strand=Plus/Plus Query 105940 GTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGT 105999 ||||| |||||| || || || ||||||| || || | |||||||| ||||| || || Sbjct 918885 GTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGT 918944 Query 106000 TGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAG 106059 ||||| || |||| || || || |||| ||| | || ||| |||||| | Sbjct 918945 CGGCATCGGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTTCAA 919004 Query 106060 AACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTG-AAGCAC 106116 | |||||| | || | | | |||| | |||| |||| || | || ||| Sbjct 919005 CTCGGCCCAGTTCCACAGATCCG-TCGGTTCCTTGTTCC-ACATCTCGTACTGCAAGATG 919062 Query 106117 CCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC 106176 |||||| | ||| ||||| | ||||| || | ||| | | ||||| || Sbjct 919063 CCCTTGCT-CACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTC 919121 Query 106177 ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTT 106236 ||||||||| ||||| | ||| || || ||||| || || | ||| | || | Sbjct 919122 ACAGCTCGCTTCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTTG 919181 Query 106237 GGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAAC 106296 || || || || | | ||||| || || || |||| || | ||||| || Sbjct 919182 AGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCAC 919241 Query 106297 ACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATA 106353 || | || || || ||||| |||||||| || ||| || ||| |||||||| Sbjct 919242 GCCGATCCCGATCGGCCTGTGGCGCATATTGGAG---CGCTTAGCCTCCGGCACGGGATA 919298 Query 106354 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 106413 |||| ||||||| | ||| ||||| || || |||| | || ||| | || Sbjct 919299 GTAATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAG 919358 Query 106414 TTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGC 106473 ||| || | ||| | || | |||| || ||| || | | |||||| || || Sbjct 919359 CTTTGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGGC 919415 Query 106474 CAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTT 106533 || |||||| || || ||||||||| | |||||| | ||| || || |||||||| Sbjct 919416 CAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAAGTT 919475 Query 106534 GGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTA 106593 ||||| || || || || | ||||| |||||||| || ||||| ||||||||||| Sbjct 919476 GGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTA 919535 Query 106594 GAGCATGTAGGGC 106606 |||||||| ||| Sbjct 919536 CAGCATGTACGGC 919548 >seq702 Length=496488 Score = 86.0 bits (94), Expect = 7e-12 Identities = 116/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103 ||||| || || || ||||| |||||| | || ||||| | || | || || || Sbjct 401409 TATGGCCGAGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGTGGGCGCC 401468 Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCA--CGGAG 155161 ||||| | || ||||| ||| | ||| ||| || || |||||||| ||||| Sbjct 401469 GGTGTCGTCGACGAGGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCATTCGGAG 401528 Query 155162 ACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACA 155201 ||||| |||||| || ||||||||||||||||||||||| Sbjct 401529 ACAAA--CTTTGAAGTTAAGAAAGGGGATCGCATCGCACA 401566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589959981052520