Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq113 132 4e-26 seq890 120 2e-22 >seq113 Length=3238079 Score = 132 bits (146), Expect = 4e-26 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || ||||| |||| || ||| | |||| |||| || Sbjct 1949103 ATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTG 1949162 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || |||| |||||| ||||| || ||||||||||| || || || || || Sbjct 1949163 CTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 1949222 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || ||| | || | ||||| || | || || ||||| |||| || |||||||| Sbjct 1949223 TGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGT 1949282 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTT 101473 | ||||| || || ||||||||| || Sbjct 1949283 GAGTGTTTTCACGAAAATCTGCATGTTT 1949310 >seq890 Length=3078589 Score = 120 bits (132), Expect = 2e-22 Identities = 207/301 (69%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 13652 TTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCGC 13711 |||||||| || || || || ||| | ||||||| || ||||| ||| ||||| ||| Sbjct 487619 TTGAATTTACGCTTGCATCCGTCATAGTTCATGTACCGAATTTTGCCAAAGATTTCGCGC 487678 Query 13712 TCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTTG 13771 ||| ||||| | ||||||| | || || ||||||||||||||| | || ||||| Sbjct 487679 TCCTTCCAGCCCTGATCGTGGATGCCCGCGATCGACCACATGCAACCGACGTACCCGTTC 487738 Query 13772 GGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGGCGTTGATTAAAGCCACT 13831 |||||||| ||||||| |||||| ||||| | ||| || || | | || || Sbjct 487739 GGATCGCGCCCATCCAGACTGTAGCGATCGTTCAGATAGATCGCCGTCTCAAGCGCTTCT 487798 Query 13832 GTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCCGTGC 13891 |||| | | ||| || | || ||||| ||||| || || | || | |||||| Sbjct 487799 TCGGGCGTTTTCGTCCACTCCAGGATCTTTTTGGCCCAGTACATGCGCAGGAAGCCGTGC 487858 Query 13892 ATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACAATATGTCATGAGTTTCG 13951 || ||||| | | | | ||| ||| || | |||||||| |||||| |||| | Sbjct 487859 ATCTTGCCCTCCTTCACCATCTGCAGCTGGGCCGAGTTCCACAGATCGTCATGCGTTTTG 487918 Query 13952 G 13952 | Sbjct 487919 G 487919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396264765917811