Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2381 114 2e-20 seq702 86.0 7e-12 >seq2381 Length=1337761 Score = 114 bits (126), Expect = 2e-20 Identities = 437/678 (64%), Gaps = 15/678 (2%) Strand=Plus/Minus Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || || ||||| |||||||||||||| || || |||||||| ||||| | || || Sbjct 919547 CCGTACATGCTGTACAAGGATGCTTGCAATCGTAAAAGTAACCAGCAGAATATCGGCACC 919488 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||||| | || || | ||||| || ||| | |||||| | ||||||||| || Sbjct 919487 ATCAAATGTTCCAACTTGTGCACTGAGATTGTGGAGTACTCGTCGAAGGATGAGGTAGCG 919428 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096 || |||||| |||| || |||||| | | || ||| || |||| | || | | Sbjct 919427 GTATGCAATCTGGCCTCGATCGCCTTGAACATGTTTGTAAAGCAAGACA---AAACGTAT 919371 Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156 || | || ||| || | ||| || | |||| || || ||||| ||| | ||||| Sbjct 919370 GACTTTGCAAAGCTGAAGGAAGTCGCTAAGACAGTGACGCGCAATCTGAACAAAATCATT 919311 Query 76157 GACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 || |||| |||||||| ||| || ||| || |||||||| ||||| || Sbjct 919310 GATGTCAATTACTATCCCGTGCCGGAGGCTAAGCG---CTCCAATATGCGCCACAGGCCG 919254 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGAT 76273 || || | || || ||||| | || |||| || || || ||||| | | || Sbjct 919253 ATCGGGATCGGCGTGCAAGGCATGGCCGATGCGTTCATCCTGATGCGCTATCCGTACGAA 919194 Query 76274 TCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTG 76333 || || || | || | ||| | || || ||||| || || ||| | ||| Sbjct 919193 AGCGAAGAGGCTCAAAAGCTAAATCAGCAAATATTCGAAACTATCTACTACGGCGCGCTG 919134 Query 76334 GAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393 || ||||| ||||| ||||| | | ||| | || ||||| | ||||| ||| Sbjct 919133 GAAGCGAGCTGTGAGTTGGCCGCTCGAGATGGTCCGTACGAGACGTACGAGGGCAGTCCG 919074 Query 76394 GCGTCCCAAGGGGTGCTT-CAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG- 76451 | | |||||| ||| |||| || |||| |||| | |||| | | | || | Sbjct 919073 GTG-AGCAAGGGCATCTTGCAGTACGAGATGT-GGAACAAGGAACCGA-CGGATCTGTGG 919017 Query 76452 -ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 |||||| | | |||||| ||| | | ||| |||| || || || || Sbjct 919016 AACTGGGCCGAGTTGAAGGAAAAGATCGCCAAACACGGTATTCGCAATTCGCTGCTGTTG 918957 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 || || ||||| || || ||||| |||||||| | || || ||||||| || || || Sbjct 918956 GCCCCGATGCCGACGGCTTCCACGGCACAAATTCTCGGCAACAATGAATCGTTCGAGCCG 918897 Query 76571 TACACAACAAACATCTAC 76588 ||||| | ||| | ||| Sbjct 918896 TACACGTCGAACGTTTAC 918879 >seq702 Length=496488 Score = 86.0 bits (94), Expect = 7e-12 Identities = 116/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 27874 TGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCG--TGATTGAAGAGAA 27931 ||||||||||||||||||||||| || |||||| |||||||||| |||||||| || | Sbjct 401566 TGTGCGATGCGATCCCCTTTCTTAACTTCAAAG--TTTGTCTCCGAATGATTGAACAGTA 401509 Query 27932 CGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAACTTGAATACCAT 27991 | ||| ||| | ||| ||||| || | ||||| || || || | || | Sbjct 401508 CAACTCCGACGTTACCCCGGTAGTCCTCGTCGACGACACCGGCGCCCACATCGATGAAGT 401449 Query 27992 GCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCATA 28031 ||||| || | |||||| ||||| || || || ||||| Sbjct 401448 TTTTCACGGCCAAACCGGAACGTGGAGCCACTCGGCCATA 401409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596548548550240