Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2381 423 2e-113 seq113 132 4e-26 seq224 116 3e-21 >seq2381 Length=1337761 Score = 423 bits (468), Expect = 2e-113 Identities = 1186/1790 (66%), Gaps = 49/1790 (3%) Strand=Plus/Plus Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213 || || || ||||||| || |||| ||||||| || || | |||||| ||||| || Sbjct 918493 TTGTCCACCGTAAACTGGATCGCATTTACGGCTGGCTTGGTACGCAGATAGTACATGCCA 918552 Query 138214 GTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 ||||| || ||||| |||| || |||| | || ||||| || || | || | || Sbjct 918553 GTTTTCAAACCCATCTTCC-AGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTGG 918611 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332 | ||| | ||||| |||||||| ||||||||| || || || ||||| ||| Sbjct 918612 CTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCACCACGATCTGCGGC 918671 Query 138333 CATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATG 138392 ||| || || | |||| |||||||| || || ||||| || || ||||| | Sbjct 918672 CATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTC 918731 Query 138393 TCGCGGTATTGTTGCAATATTTTGAAT-GCTCCC--GTTGGCCGCAATGATGCGATTTCT 138449 ||||||| | ||||| ||||| || | ||| ||||| | ||| | || | | | Sbjct 918732 CTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAAT--TTCGTTCT-T 918788 Query 138450 CATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGAC 138509 |||||| | ||||| || ||| |||| || | | |||| ||| | || Sbjct 918789 CATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCAC 918848 Query 138510 CTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGA 138569 ||| || || || | || || || | | ||||| ||| ||| | ||||| ||||| Sbjct 918849 CTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGA 918908 Query 138570 TTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGA 138629 ||| ||||| || ||||| || ||||||| || |||||||| |||| || || || Sbjct 918909 TTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGA 918968 Query 138630 ATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCT 138689 ||| || | |||||| ||| |||||| | | | ||||| ||||| ||| | Sbjct 918969 ATTGCGAATACCGTGTTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGT 919028 Query 138690 AGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTA 138749 |||| ||||||||||| |||||||| || || ||| || | |||||||| ||||| Sbjct 919029 CGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCTCGTA 919088 Query 138750 CGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACCATAGT 138808 || ||||| ||| | ||| || |||||||| |||||| || ||||| || |||| Sbjct 919089 CGTCTCGTACGGACC-ATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGT 919147 Query 138809 AAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGC 138868 | ||||||||| || |||||||| ||| | | ||||| |||| |||||||| || Sbjct 919148 AGATAGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGC 919207 Query 138869 GGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCA 138928 | | || ||||||| ||||||| ||||||||||| | |||| || | ||||||| Sbjct 919208 GCATCAGGATGAACGCATCGGCCATGCCTTGCACGCCGATCCCGATCGGCCTGTGGCGCA 919267 Query 138929 GATTTGA-CGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTTGTTTA 138985 ||| || ||||| | || || | ||||| || || ||||| ||||||||||| | Sbjct 919268 TATTGGAGCGCTT---AGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCA 919324 Query 138986 AATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTT-CAAAATCGTATGTGCCCCCG 139044 ||| ||| || ||||| || | | || | | || |||| || || || Sbjct 919325 GATTGCGCGTCACTGTCTTAG-CGACTTCCTTCAGCTTTGCAAAGTCATACGT------T 919377 Query 139045 TTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCC 139104 ||||| | | ||||| |||| | |||||||| | ||||| ||||| Sbjct 919378 TTGTCTT------GCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCT 919431 Query 139105 ACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGT 139163 || || | | | || ||| || ||||| || | ||||| || ||| ||||| || Sbjct 919432 ACCTCATCCTTCGACG-AGTACTCCACAATCTCAGTGCACAAGTTGGAACATTTGATGGT 919490 Query 139164 ACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGT 139223 || | ||| || || || ||||| || || |||||||| ||||| ||||| ||||| Sbjct 919491 GCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGCAC 919550 Query 139224 GCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACG 139283 ||| ||||||||||| | || || || ||| ||| || | | || || Sbjct 919551 GCCGGTTTCCACTTGCGATTCGATTATCGCAAACCACAGATCCTGCGCCTTCACCTGTCG 919610 Query 139284 CACGTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAG 139341 || |||| | | || ||||||| ||| || | ||||| ||| || || Sbjct 919611 CA--TAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAG 919668 Query 139342 GCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTG 139401 | ||| || || || |||| | || || ||||| || ||| | ||||||||| Sbjct 919669 GTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCC 919728 Query 139402 ACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTA 139461 || ||| ||||||||| ||||| ||||||| ||| | | || || || || Sbjct 919729 ACACGCTGCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCGGACC 919788 Query 139462 TCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGT 139521 || ||| || |||| |||| | || || || || | || | ||||| || Sbjct 919789 TCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGGC 919848 Query 139522 TCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACA 139578 || ||||||||||| | ||| || ||| ||| || || |||||||||| ||| | Sbjct 919849 TCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTACCGCCCTGATCGACGTACCGTGCC 919908 Query 139579 GCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG 139638 | ||| ||| | ||||||||||||||| |||||||| | | | ||||| || | ||| Sbjct 919909 GTATTGTTGTAGACGCGCAACATCGGCACCAGACCGTTTGAAATCCCGTTCGTAC--CGG 919966 Query 139639 ATGGGACTGTTGCGAGCTCG-GACGTCA-TGTACATTGATGCCGATTCCGCCGCCAAATT 139696 | | ||| | | || || || || || || | ||||| || ||| | | | Sbjct 919967 AGATGTACGTTCCCTTCGCGCGAATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACT 920026 Query 139697 TGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGC 139755 | || |||| | || | || | | || ||||| || || ||||| || || | Sbjct 920027 TTGAAATTAGGGCACACT-GCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGAC 920085 Query 139756 ATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTA 139815 || || | ||| ||||| |||||||| || || | | ||| | || ||||||| ||| Sbjct 920086 ATGGTCAACAGGAAGCAGGACGAAAGCTGGGGGCGCTGCGTAGCCGCCGCAAACATAGTT 920145 Query 139816 GGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCT-CA- 139873 || ||||| || || | | |||| || | ||| || ||||| |||| || Sbjct 920146 GGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGAT--CGCTGCAT 920203 Query 139874 CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGG 139923 | || ||| || ||||| || | || || ||||||||||| || ||| Sbjct 920204 CGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGG 920253 >seq113 Length=3238079 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 854706 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 854765 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 854766 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCA 854825 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | |||| || || || Sbjct 854826 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAA 854885 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || || ||||| |||| ||||||| || Sbjct 854886 CATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGG 854933 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || || || || || | | Sbjct 1949306 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 1949247 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| ||||| || || || ||||| Sbjct 1949246 GACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 1949187 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || |||||||||||| | | | || || || ||| Sbjct 1949186 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAAC 1949127 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||||||||| || || ||||| ||||| | || || || Sbjct 1949126 ATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTCCGTGGTGG 1949080 >seq224 Length=3387546 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || ||||| || ||| | || Sbjct 1794088 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTCGAACCATCC 1794029 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 1794028 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 1793969 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || |||||||||||| | | | |||| || |||||| Sbjct 1793968 CAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 1793909 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || |||| | || |||| || || Sbjct 1793908 ATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGTCTGCGTGGTGG 1793862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449881724238440