Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq335 167 2e-36 seq47 84.2 2e-11 >seq335 Length=3842677 Score = 167 bits (184), Expect = 2e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 |||||||| || ||||||||||| || |||||||| |||||||| | ||||| || || Sbjct 142478 TGCGTTTGAGCTCCCAGCTCGCAGCCAAAGTACTTCGTCGGGTAGGTTGCCGGGCGGCCG 142419 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||| || | |||| |||||| ||||| || |||||||||||||| ||||| || Sbjct 142418 ATCGCGCGCGCCACATCGGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCCTTACCC 142359 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || ||||| ||| |||||| ||||| ||||| |||||||| ||| | ||||||||| Sbjct 142358 TCTACCTTCGCGTTGATGCGGGGCATCTTGTACCGGTAGAAGATGTCGGTCACATTGCGA 142299 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || |||||||| || |||| Sbjct 142298 TTCACGTTCACGGTAGCCAT 142279 Score = 150 bits (166), Expect = 1e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| || | ||||| ||||| | ||| || | | |||| ||||| | Sbjct 142786 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTCACCTCGAGCGGCCCGTGGAA 142727 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || ||||||||||| |||| | ||| || | || ||||| || || || Sbjct 142726 GCCGCACGCCTTGCAGCCCTGCGAGATCGTACCCTTCTTGGACGAGACGATCAGATCCGT 142667 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||||||||| || ||||| |||| |||||||||||||||||| || || ||||| || Sbjct 142666 CTCCGGGTTGTCGCACTCCGGGCACAGCACAAACTTGCGGATGAACCCGTCGAGCAGATC 142607 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| | | ||||| || ||||| || ||||| |||||||| Sbjct 142606 CTGCAGCTTGGCCGCATCGTGCGAACCGTTCACAATGAAGCGTTCGTT 142559 >seq47 Length=618598 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 103738 CGAAGCTGGTTTCTTTTACACCGGCAAAAGCGACAAAGTCAAATGCTTTTACTGCAACGG 103797 ||| ||||| ||||| ||||| |||| |||||| ||||| ||||| ||| ||| Sbjct 560266 CGACGCTGGCTTCTTCTACACGGGCATGAGCGACCGCGTCAAGTGCTTCAGCTGTGGCGG 560325 Query 103798 CGGTCTGAACAATTGGGAGCAAGATGACGACCCGTGGCAACAACACGCGCTTTGGT 103853 || || || | |||||||| || |||||||||||||| || |||||| | |||| Sbjct 560326 TGGGCTCAAGGACTGGGAGCAGGAGGACGACCCGTGGCAGCAGCACGCGATCTGGT 560381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412827396055739