Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq890 102 1e-16 >seq890 Length=3078589 Score = 102 bits (112), Expect = 1e-16 Identities = 201/292 (69%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 || || | ||| |||| |||||| ||| ||||| | | || | |||||| ||| Sbjct 487929 CTGGAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAG 487870 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 || || || ||||| | || | || ||||||||||| |||||||| || || ||||| Sbjct 487869 GAGGGCAAGATGCACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACG 487810 Query 183115 AGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173 | ||| || ||||| || ||||| | |||||| ||||| || ||| || || Sbjct 487809 AAAACGCCCGAAGAAGCGCTTGAGACGGCG-ATCTATCTGAACGATCGCTACAGTCTGGA 487751 Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT-A 183232 || ||||| ||||| ||||| ||||| |||||||| || || | |||||| | Sbjct 487750 TGGGCGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCA 487691 Query 183233 GAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284 | || ||||| || | || ||||| || || | || ||||| ||||| Sbjct 487690 GGGC-TGGAAGGAGCGCGAAATCTTTGGCAAAATTCGGTACATGAACTATGA 487640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903379320877280