Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2381 331 9e-86 seq224 95.1 1e-14 seq113 93.3 4e-14 seq2001 91.5 1e-13 >seq2381 Length=1337761 Score = 331 bits (366), Expect = 9e-86 Identities = 1005/1535 (65%), Gaps = 32/1535 (2%) Strand=Plus/Plus Query 146890 TGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAA 146949 || || ||||| || |||||||||| |||||| || || || || || ||| | Sbjct 918838 TGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTAC 918897 Query 146950 GGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCC 147009 ||||| || || ||||| ||||| | ||||| ||||||| || || ||||| ||| Sbjct 918898 GGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCC 918957 Query 147010 ACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCC 147069 | || || ||||| || | ||||| ||| || |||||||| ||||| | Sbjct 918958 AACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTC 919017 Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 |||| || || | ||||||||| |||||||| | | || || | ||| Sbjct 919018 CACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGA 919077 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||||| || |||| ||| || || || ||||| |||||||| || || ||| Sbjct 919078 CTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGC 919137 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 || || ||||| || |||||| ||||| | ||||| || |||||||| ||| Sbjct 919138 GCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCG 919197 Query 147250 TAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 || || ||| |||| || | || |||||||||| || || | |||| ||||| || Sbjct 919198 TACGG-ATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCACGCCGATCCCGATCGG 919256 Query 147309 TCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAAT 147368 | || ||| |||||| || || | |||||||| ||| |||||| || Sbjct 919257 CCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGAT 919316 Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428 ||||| || || ||| || |||| | | || || || | || ||||| || Sbjct 919317 TTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGT 919376 Query 147429 CCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCG 147487 ||||| | || || || ||||| |||||| || ||||||||||| || || Sbjct 919377 TTTGTCTTGCTTTACAAAC--AT--GTTCAAGGCGATCGAGGCCAGATTGCATACCGCTA 919432 Query 147488 TCTCTTCGG-CGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACT 147546 ||| || || || ||||| ||| || || | ||||| |||| ||||| ||| Sbjct 919433 CCTCATCCTTCGACGA-GTACTCCACAATCTCAGTGCACAAGTTGGAACATTTGATGGTG 919491 Query 147547 CCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 147606 || | ||| ||||| || ||||| |||||||| || || ||| | ||||||||||| || Sbjct 919492 CCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGCACG 919551 Query 147607 CCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGC 147663 ||||| || ||||||| ||| | || ||||| ||| |||||||| |||| | Sbjct 919552 CCGGTTTCCACTTGCGATTCGATTATCGCAAACC---ACAGATCCTGCGCCTTCACCTGT 919608 Query 147664 TGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAG 147723 || | |||| ||||| || ||||||| | ||||| | ||| ||||| ||||| || Sbjct 919609 CGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAG 919668 Query 147724 CAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTA 147783 || | || |||||||| | ||||| |||||||| |||||| |||| ||| | Sbjct 919669 GTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCC 919728 Query 147784 ACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAA 147843 || || |||| ||||| ||||| | |||||| ||||| | | || || || | Sbjct 919729 ACACGCTGCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCGGACC 919788 Query 147844 TCCTCGGCGCCCATGTTGCGTTTCAAATTAAG-CACGCTATAGATGTCGGCGTGCCAGGG 147902 ||||| ||| |||| |||| || || || | | | || ||| | ||||| || Sbjct 919789 TCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGA-ATATATCGCCATGCCACGG 919847 Query 147903 TTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGCAC 147959 || | |||| ||| | || || ||| || |||||||| ||||| | || | Sbjct 919848 CTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTACCGCCCTGATCGACGTACCGTGC 919907 Query 147960 CATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT---GGA 148016 | | ||||| | ||||||| ||| || |||| ||| | | | | ||||| || ||| Sbjct 919908 CGTATTGTTGTAGACGCGCAACATCGGCACCAGACCGTTTGAAATCCCGTTCGTACCGGA 919967 Query 148017 ATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTA 148076 ||| | | || || || | ||||||||| | || ||||| ||| | | Sbjct 919968 ---GATGTACGTTCCCTTCGCGCGAATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 920024 Query 148077 CTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTT 148136 |||||| || || || | || || ||||||||| || ||||| || || Sbjct 920025 CTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATC--TTCG 920082 Query 148137 GAC---GCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAG 148193 ||| | ||| || || || || | | || || | |||| |||||| || | Sbjct 920083 GACATGGTCAA-CAGGAAGCAGGACGAAAGCTGGGGGCGCTGCGTAGCCGCCGCAAACAT 920141 Query 148194 GGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTC 148253 || || ||||| ||||| | | || || || ||||| || || | Sbjct 920142 AGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGC 920201 Query 148254 TTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 |||||||| ||||| || ||||| | || |||||||| ||||||||||| || || || Sbjct 920202 ATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTC 920261 Query 148314 GGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTA 148373 | | | || |||||||| || | ||| ||| | |||||| | || || || Sbjct 920262 GACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATA 920321 Query 148374 CTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 ||||| | || || | |||||| ||||||| Sbjct 920322 GTTGTACCCGAAGTCCCGATCGTAAATAATGGCCG 920356 >seq224 Length=3387546 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| ||| | | | ||||| || || ||||| ||||| || ||| Sbjct 1793867 ACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGT 1793926 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| || ||||| || || | |||| |||||||| |||||||| || || || Sbjct 1793927 GCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCC 1793986 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || |||| | || | ||||||| || || || |||| Sbjct 1793987 CTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCGGATGGTTCGACCTCGAG 1794046 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || ||||||||||| | |||||||||||| Sbjct 1794047 GGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 1794088 >seq113 Length=3238079 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||||| |||| ||| | | | ||||| || || |||||||||||| || || Sbjct 854927 CGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTG 854868 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||| || ||||| || |||| |||| |||||||| |||||||| || || || Sbjct 854867 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCC 854808 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || || |||| | || | ||||| | ||||| || || | Sbjct 854807 TCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGG 854748 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || ||||| || || ||||| | ||| |||||||| Sbjct 854747 GTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 854707 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| ||| | | | || || || ||||||||||||||| | || || | Sbjct 1949092 CGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCA 1949151 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || |||| |||| |||||||| |||||||| || |||||||| || Sbjct 1949152 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTG 1949211 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| |||| | || | || || | ||||| || || | || | Sbjct 1949212 TCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 1949271 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || || || ||||| | ||||||||||||| Sbjct 1949272 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 1949307 >seq2001 Length=1904535 Score = 91.5 bits (100), Expect = 1e-13 Identities = 262/397 (66%), Gaps = 7/397 (2%) Strand=Plus/Plus Query 46776 AAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATG 46835 ||||| | ||||| |||| |||||| |||| ||| |||| | | |||||| | Sbjct 1560132 AAGGCGGACTGGGCGCTGAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTC 1560191 Query 46836 GTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTAC 46895 ||||||||||| || || || | || || ||||| || ||||| || || | Sbjct 1560192 GTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGCAGCTTCGCCGCGATCTTCTGG 1560251 Query 46896 ATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGAC 46955 | || | ||| | ||||| || || || ||| |||||| |||||||||||||| Sbjct 1560252 CTGAAGAAACGTGGCCTGATGCCAGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGAC 1560311 Query 46956 GAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAAATTA 47015 ||||| || ||| |||||||| || || | |||| | ||| | || | Sbjct 1560312 GAAGGGCTGCACTGCGACTTTGCCTGCCTGATGTTCAAGTATCTGGTGCAGAAGCCGTCG 1560371 Query 47016 AACTCGGA-CACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTT 47074 || ||| | || | ||| || | | || ||||| ||||| ||||||| | Sbjct 1560372 AA---GGAGCGCGTGACGGAG-ATCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCT 1560427 Query 47075 TACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATA 47133 || ||| ||||| || | |||||||||||||| | ||| |||| | || | Sbjct 1560428 GACGAAGGCACTGCCGGTGGATATGCTGGGCATGAAC-TGCGATCTGATGTCGCAGTACA 1560486 Query 47134 TTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 47170 ||||||||||||| |||||| || || | |||| || Sbjct 1560487 TTGAGTTTGTGGCCGATCGTTTGCTGCTCGAGCTGGG 1560523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476594381582280