Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2381 98.7 9e-16 >seq2381 Length=1337761 Score = 98.7 bits (108), Expect = 9e-16 Identities = 494/778 (63%), Gaps = 23/778 (3%) Strand=Plus/Plus Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697 ||| || || ||||| | ||| |||| || || || | ||||||||||||||| || || Sbjct 918498 CACCGTAAACTGGATCGCATTTACGGCTGGCTTGGTACGCAGATAGTACATGCCAGTTTT 918557 Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757 |||||| ||| |||| || ||| || || | || | |||| | || || || Sbjct 918558 CAAACCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGC 918617 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 ||| || || | |||||| ||||||||| | | || || ||||||||||| || Sbjct 918618 GACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCACCACGATCTGCGGCCATTTT 918677 Query 136818 CAATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875 | | || |||| | || ||||| | ||||| | || || | | || Sbjct 918678 GAT--GCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTCCTGC 918735 Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTT---TCATCATG--- 136929 || || | | || || || | ||||| ||||| | |||| || ||||| Sbjct 918736 GGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCATGTCG 918795 Query 136930 AGATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACT 136989 ||||| | | |||| || | | | | ||||| || || || || Sbjct 918796 AGATCCCACAGACCCATGTTGGTC------AAATCCTGCAGAAGATGATGGTTCACCACC 918849 Query 136990 TGATATTCGCCCGATAGCACTCTGCGTAC-GTACAGATTACTAGTGAACGGCTCGAACGA 137048 || | |||||||| ||||| | || || ||| | || ||| ||||||||||||| Sbjct 918850 TGGAACTCGCCCGACAGCACGC-GCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGA 918908 Query 137049 TTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGA 137108 ||| ||||| || | ||| ||||| || | || |||||||| || | || || || Sbjct 918909 TTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGA 918968 Query 137109 ATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTT 137168 ||| || | ||||||| ||| | | || ||| | ||| |||||||||||||| | Sbjct 918969 ATTGCGAATACCGTGTTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGT 919028 Query 137169 CGATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGC 137228 || || | ||||||| || ||||||| | || || | ||||| | | Sbjct 919029 CGGTT---CCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCTC 919085 Query 137229 ATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATA 137288 || | || || | || | | |||| ||| ||| | || ||||| || Sbjct 919086 GTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTA 919145 Query 137289 GTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCAT 137348 ||| ||||||||| | |||| ||| | | | ||| |||| ||| ||||| || || Sbjct 919146 GTAGATAGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGG-AT 919204 Query 137349 ATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTG 137405 | | || | ||| ||||| || | ||||| | ||||| ||||| || ||||| Sbjct 919205 AGCGCATCAGGATGAACGCATCGGCCATGCCTTGCACGCCGATCCCGATCGGCCTGTG 919262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445078693731360