Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2381 333 4e-86 >seq2381 Length=1337761 Score = 333 bits (368), Expect = 4e-86 Identities = 1187/1840 (65%), Gaps = 28/1840 (2%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || ||||| ||||||||||| || ||||||| ||| | |||| ||||||||| Sbjct 918523 GCTGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAAACCCATCTTCCAGCCGTAGAAA 918582 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || || || ||| ||| |||| || || | ||||| || | |||||| Sbjct 918583 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 918642 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA-ATTTC 68573 |||||||| || || || | |||||| |||||||| || || ||| || || || Sbjct 918643 TGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGC-ACGTTTTCACCGAGATCTC 918701 Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGA 68630 ||| | || || | | | || || | || | || | ||||| || || Sbjct 918702 CCATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 918761 Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 |||| | ||| | |||| ||||| || || || ||||| | | || || Sbjct 918762 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 918821 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | | || ||||| | || || | || || || || || | ||| | | | |||| Sbjct 918822 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 918881 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || || || || || | |||||||| || || |||||||| || || || || Sbjct 918882 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 918941 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 || ||||| || |||| || | ||| | || ||| ||| | ||| || || || Sbjct 918942 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTT 919001 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 | | ||| | ||| ||||| | ||| | ||||| | ||||| || | || Sbjct 919002 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 919061 Query 68931 TCCGTTACTTGCATATGAT--CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988 || || || || || || | || || || || || || || | | || | Sbjct 919062 GCCCTTGCT--CACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAAC 919119 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 ||||| || || || | || ||||| || || |||||||| || | || ||| || | | Sbjct 919120 TCACAGCTCGCTTCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTT 919179 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 || || ||| || ||| | ||||| | | || || || ||||| |||| || || Sbjct 919180 TGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGC 919239 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168 || || || ||||| || || || | | |||| || | | ||| || || | ||||| Sbjct 919240 ACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAG 919299 Query 69169 TAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228 ||||| | ||| || ||||| || ||||| || ||| ||| | || ||||| || Sbjct 919300 TAATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGC 919359 Query 69229 TTGAGAAAATCAAA----TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAG 69284 || ||| ||| | | ||| || || ||||||| |||| || | || || || Sbjct 919360 TTTGCAAAGTCATACGTTTTGTCTTGCTTTA-CAAACATGTTCAAGGCGATCGAGGCCAG 919418 Query 69285 ATTACAAACTGCTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341 ||| || || |||||||||| | || | || | | ||||| || || | || Sbjct 919419 ATTGCATACCGCTACCTCATCCTTCGAC---GAGTACTCCACAATCTCAGTGCACAAGTT 919475 Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401 ||||||||| || || | ||| ||||| ||||| || || || || |||||||| Sbjct 919476 GGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTA 919535 Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461 || || |||| || ||||| | || |||||||| || | ||| | || ||| Sbjct 919536 CAGCATGTACGGCACGCCGGTTTCCACTTGCGATTCGATTATCGCAAACCACA-GATCCT 919594 Query 69462 A-GCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTC 69518 || || | | ||| ||| || | ||||| || || || || ||| || Sbjct 919595 GCGCCTTCAC--CTGTCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTC 919652 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 ||| || || ||||| || | || ||||| || | || ||||||| ||| Sbjct 919653 GAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCA 919712 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638 || || | ||| || || | ||| || || || || ||||| || || ||| | Sbjct 919713 CATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCACAGTGCGTAAAACAT 919772 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 || | | | || || || || || ||||| || |||||||||||||| | || Sbjct 919773 GTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATAT 919832 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758 ||| |||||| || || ||||| || || | |||| || || || || || ||||| Sbjct 919833 ATCGCCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTACCGCCCTG 919892 Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818 ||| | ||| | || || || || ||||| | || |||||| | | ||| || || | Sbjct 919893 ATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAACATCGGCACCAGACCGTTTGAAAT 919952 Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTA 69877 || || || || || || || |||| | ||||||||| | | | | || || | Sbjct 919953 CCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGAATA-CAGTGCACGTTCAGTCCGA 920011 Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937 | || || ||| || || ||||| ||||| | |||| ||||| || || ||||| | Sbjct 920012 TGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAA 920071 Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997 ||||||| || |||| | | || || ||| || | || | | || ||| Sbjct 920072 TGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGGCGCTGCGTAGCCG 920131 Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057 | ||| | || || || ||||| || || | || || ||||||||||| || | Sbjct 920132 CCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCT 920191 Query 70058 CAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117 | || |||| || || ||| ||| || || || || || ||||||| ||| |||| Sbjct 920192 CGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCT 920251 Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177 | || || || || |||| || || |||| || ||||||| ||||| ||||||| Sbjct 920252 GGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAA 920311 Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 | || ||||||||||| ||||| | ||||||||||| Sbjct 920312 AGCCGAAATAGTTGTACCCGAAGTCCCGATCGTAAATAAT 920351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686884560705720