Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2041 129 5e-25 >seq2041 Length=90304 Score = 129 bits (142), Expect = 5e-25 Identities = 195/276 (71%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 19542 AAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC 19601 |||| ||| ||||| ||||| | |||||| | || ||||| ||||| | ||| | Sbjct 57379 AAGTGGTTTACACATAATAATTTTCGATGAAATAGATGCAATTTGTAAAGCTCGTGGTAC 57438 Query 19602 TG---GTGTAAAT---GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGA 19655 || | | |||| || || ||||| || |||||||| ||||| || ||||| |||| Sbjct 57439 TGTCGGCGGAAATTCTGGTGTGCATGATACGGTTGTCAACCAACTGTTGGCAAAAATAGA 57498 Query 19656 CGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAAT 19715 |||||| | ||| | || || ||||| || ||||| ||||| ||| || || | || Sbjct 57499 TGGTGTTGAGCAATTAAACAACATTTTGGTAATTGGAATGACCAATCGAAGAGATATGAT 57558 Query 19716 AGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGA 19775 |||| || || ||| |||| ||||| | ||| | | || ||||| | | || | Sbjct 57559 AGACGAAGCATTGTTAAGACCTGGTCGTCTAGAAGTTCAAATGGAAATCAGTCTTCCTAA 57618 Query 19776 TGAATGTGGACGTGTGGAAATTTTAAACATACATAC 19811 |||| || |||||| ||||||| ||||||||||| Sbjct 57619 TGAAGAAGGTCGTGTGCAAATTTTGAACATACATAC 57654 Score = 120 bits (132), Expect = 2e-22 Identities = 213/308 (69%), Gaps = 7/308 (2%) Strand=Plus/Plus Query 19223 GGAATGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTA 19282 ||| | || |||| ||| ||||| |||||| | || ||| || || ||||| Sbjct 56924 GGATTTTGGAAGA-ATGGGCATTGGTGGATTGGATCGTGAATTTAATGCGATATTTCGAC 56982 Query 19283 GAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATG 19342 | || |||| ||||||||||| | |||| || || ||||| ||||||||||||| | Sbjct 56983 GTGCTTTTGCTTCGCGTGTTTTCCCACCAGAGGTGGTTGAACAACTGGGATGTAAACACG 57042 Query 19343 TTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAAC 19402 | || || | || ||||| || || ||| ||| |||||| | || ||| || || Sbjct 57043 TAAAGGGCATTCTTCTATATGGACCTCCTGGTACTGGTAAAACACTTATGGCGCGACAAA 57102 Query 19403 TTAGTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAA 19459 || | | | ||| | | | |||| || || ||||||||||| | || ||| Sbjct 57103 TTGGAACAATGTTAAATGCTCGAGAACCA---AAGATAGTAAATGGTCCGCAGATTTTAG 57159 Query 19460 ATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAG 19519 |||||||||| ||| |||| |||| ||||| || || | || ||||| || ||||| | Sbjct 57160 ATAAATATGTCGGTGAATCAGAAGCTAATGTGCGTCGACTATTCGCTGATGCCGAAGAGG 57219 Query 19520 AACAAAAA 19527 || ||||| Sbjct 57220 AAGAAAAA 57227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397442325402115