Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2381 129 7e-25 seq702 86.0 8e-12 >seq2381 Length=1337761 Score = 129 bits (142), Expect = 7e-25 Identities = 441/679 (65%), Gaps = 15/679 (2%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| | ||| | ||||| || || || ||||||| || || | |||||||| ||||| Sbjct 918879 GTAAACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGA 918938 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||| || |||| || || || |||| ||| | | ||| ||| Sbjct 918939 AGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTC 918998 Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG- 110883 ||| | | |||||| | || | | | |||| | |||| |||| || |||| Sbjct 918999 CTTCAACTCGGCCCAGTTCCACAGATCCG-TCGGTTCCTTGTTCC-ACATCTCGTACTGC 919056 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 ||| |||||| | | ||| ||||| | || || || | ||| | | || Sbjct 919057 AAGATGCCCTTGCT-CACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGC 919115 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 ||| ||||||||||| ||||| | ||| || || ||||| || || | ||| | Sbjct 919116 CAACTCACAGCTCGCTTCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAG 919175 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063 || | || || || || | | ||||| || || || |||| || | || Sbjct 919176 CTTTTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCC 919235 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---AC 111120 ||| || || | || || || ||||| |||||||| || ||| || ||| || Sbjct 919236 TTGCACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAG---CGCTTAGCCTCCGGCAC 919292 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 |||||| |||| ||||||| | ||| ||||| || || |||| | || ||| Sbjct 919293 GGGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTC 919352 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240 | || ||| || | ||| | || | |||| || ||| || | | |||||| Sbjct 919353 CTTCAGCTTTGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAAGGCGAT 919409 Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300 || |||| |||||| || || ||||||||| | |||||| | ||| || || || Sbjct 919410 CGAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCA 919469 Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360 |||||||||| || || || || | ||||| |||||||| || ||||| ||||| Sbjct 919470 CAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATC 919529 Query 111361 CTTGTAGAGCATGTAGGGC 111379 |||||| |||||||| ||| Sbjct 919530 CTTGTACAGCATGTACGGC 919548 >seq702 Length=496488 Score = 86.0 bits (94), Expect = 8e-12 Identities = 116/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663 ||||| || || || ||||| |||||| | || ||||| | || | || || || Sbjct 401409 TATGGCCGAGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGTGGGCGCC 401468 Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCA--CGGAG 164721 ||||| | || ||||| ||| | ||| ||| || || |||||||| ||||| Sbjct 401469 GGTGTCGTCGACGAGGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCATTCGGAG 401528 Query 164722 ACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACA 164761 ||||| |||||| || ||||||||||||||||||||||| Sbjct 401529 ACAAA--CTTTGAAGTTAAGAAAGGGGATCGCATCGCACA 401566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628009838320800